Oncorhynchus nerka (sockeye salmon): 115131604
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Entry
115131604 CDS
T07952
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
one04145
Phagosome
one04218
Cellular senescence
one04514
Cell adhesion molecules
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115131604
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115131604
04145 Phagosome
115131604
09143 Cell growth and death
04218 Cellular senescence
115131604
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115131604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115131604
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
115131604
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115131604
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
Antigens
115131604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
Ig_2
Ig_3
TMEM154
C2-set_3
Psg1
C2-set_2
DUF6724
Glycophorin_A
RAMP
LAX
vWA-TerF-like
Protocadherin
KIAA1549
EphA2_TM
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
115131604
NCBI-ProteinID:
XP_029519296
LinkDB
All DBs
Position
LG7:17344653..17353782
Genome browser
AA seq
360 aa
AA seq
DB search
MKTRLIGAMKTYFIILFCIHGALSVKHSLRYFYTTSSEIPAFPEFVDMGMVNDQVISRYD
SITKRKVPKQSWMETVFDQQYWDSTTKDLSGAESVFKTNIQIAQKRFNQTGGMHISQDMY
GCTWDDETGFTEGFHHIGYDGQDLLAFDVKTATWIASVPQALHSKMKWEMDLSSIEIKKS
YLTQDCIKWLKKYLDYGKTTLQRTVPPSVSLLQKTPSSPVTCHATGFYPSGVMVSWQKDG
QEQHEDVENGETLPNDDGTFQKSTHLTVTPEEWKNNKYQCVVQVTGIKEDFIKVLTEFEI
QTNWGDPAPNIILIIGGVVALLLVVVVVVVVVIWKKKSKKGFVPASSSDTDWDKSGQGFL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccagactcatcggcgccatgaagacatattttattatcctcttttgtattcat
ggagctttatcagtgaaacattccctgcgctacttctacacaacctcctcagaaatccca
gccttccctgagtttgtggacatggggatggtgaatgatcaggtcattagccgctatgac
agtatcacgaagaggaaggtccccaagcagagctggatggagacggtttttgaccagcag
tattgggatagcaccacaaaggacctgagcggtgcagagagcgttttcaaaaccaacatt
cagatagcacagaagcgtttcaatcaaacaggaggcatgcacattagccaggacatgtat
ggctgtacatgggatgatgagacaggattcacagaagggtttcaccacattggatatgat
ggacaagacctcctggcatttgacgtgaagacagcgacatggattgcctcagtcccgcag
gctctccactccaaaatgaagtgggaaatggacctgtctagcattgagatcaagaaaagc
tacctcacccaggattgcattaagtggctgaagaagtacctggactatgggaagactact
ctgcagaggacagtccctccctcagtgtctctgctccagaagaccccctcctctccagtg
acctgccacgctacaggtttctaccccagtggagtcatggtgtcctggcagaaagatggg
caagaacagcatgaagatgtggagaatggagagactctcccgaacgatgatggaaccttc
cagaaaagcacccacctcacagtgacgcctgaggagtggaagaacaacaagtatcagtgt
gtggttcaggtcactggtatcaaggaggacttcatcaaggttctgactgagtttgagatc
cagaccaactggggtgacccagcccccaacattatcctcatcattggaggggtggtagct
ctcctcctggtcgttgttgtcgttgtcgttgttgtcatttggaagaagaagagcaagaaa
ggctttgttccagccagctcttccgacactgactgggacaaatctgggcaaggtttcctg
taa
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integrated database retrieval system
