Oncorhynchus nerka (sockeye salmon): 115133993
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Entry
115133993 CDS
T07952
Name
(RefSeq) retinoblastoma-like protein 2
KO
K16332
retinoblastoma-like protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04068
FoxO signaling pathway
one04110
Cell cycle
one04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
115133993
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115133993
04218 Cellular senescence
115133993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115133993
Transcription factors [BR:
one03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
115133993
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Ortholog
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GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
115133993
NCBI-ProteinID:
XP_029523347
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Position
LG9a:complement(4790066..4819777)
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AA seq
1092 aa
AA seq
DB search
MNEEEAFLQKIRLGFEELCRALNMDVEASNEAWRSYESIRKKYTLEGSDLHWLACAIYVA
CRTPVPTVDKGTAEGNYVSLTRILRCSEQSLIEFFNKIKKWQDMASLPRDFRHSTEKLER
NFTVSAVIFKKYVPIFKAIFKAPSDEPPRVHRSRKQRRHPCTVAEVFNFCWILFVHAKGN
FPMISDDLVNSYHLLLCALDLVFSNALLCNTRKELLNPNFKGLPEDFSSKDYKPTAGPYC
FIEQLCELHDGLVLEAKGVKEHFWKPFISRLFHKKILKGKEESLTGFLDPMNFGDSSVSI
GRVYEEHVLATGGLDDRIFLGEGTPGPCLCKGAENQDASAYRLYNSQTASVLKVSTSFTG
RNYVQDNSLCMPVSTAMQSVGRLHSLLTGLKRGPSRRLKDLLRSCARDPSEVISTRLKDM
CQLFCQHYEGNWEQNAGLGKDIAVYFCLAEALYYKTLEAVIDQEKKRLGNLDLSGILEQD
VFQRSLLACCLEIVIFSYRPPGDFPRIIHIFQLPAYHFYKVIEVLVRVEQGLFRKVVKHL
NQVEEQVLESLAWRGGSPLWDSVRGAKNQPPSCQEVMPPQHLEDGDGAAPLTPSNHGTDL
GANCGGKGVSTSTTTMLDRYSCPTTGSARRRLFVDVSCDAPSDPSTTNLTTNLRTSQAIP
AGQTVVTMATATVTANNGQTVTIPVQGIANENGGITFIPVKVSVTGQGTLQPLSAQSLTG
TLTSQPQTTTLKSPTLQGSHAAGKPIEKPAAQGPSNNRPQKKSSLSLFFRKVYHLASVRL
RDMCAKLDISSELRRKIWTCFEYSLVHYTELMMDRHLDQLLMCAVYVMTKVTKEDKSFQN
IMKCYRSQPQASSSVYRSVLISGRKRRHSGSSERNGQSSPTETSHEGSGDSSPVPMRSTS
ALPTPQPGSTPSTPTLAPSTFLSTSSSLPPSQQQDDEGGVMVGGRVEERGDLIHFYNRVY
IKQMRHFALRYSPSSSSAGLESPPLCLYPSLRTSSPRRVLLSHNHSIYISPHKASDSPPT
ATAQDKIFYYICSGPANRLAEINSMIRTGETPTKKRSMQLEEEPSPKRLCPDNQTALFRR
LQDVANDRSSSH
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggaggaagcctttttgcagaaaataaggctggggtttgaagaactctgtcga
gctttgaatatggacgtggaggcgagcaacgaagcatggaggagttacgaaagcataaga
aaaaaatacacattagagggcagtgacctacactggctggcctgtgccatttatgtggcc
tgtagaacaccagtaccaacagtggataagggtactgcagagggaaactacgtctccctg
acccgaatactccgctgttcagaacaaagcctcattgagttcttcaacaagataaagaaa
tggcaggatatggccagtcttcctcgggacttccgccacagcacggagaagctggagaga
aatttcacagtttccgccgtcatcttcaagaaatacgtccccatcttcaaagccatcttt
aaggcgccctcggatgaaccgcccagagtccacaggagccgcaaacagagacgccatccc
tgcaccgttgctgaagtcttcaacttctgctggattctgtttgtccacgctaaaggaaac
ttccctatgatcagtgatgacctagtgaattcgtaccatctccttctgtgtgctctggac
ctggtcttctccaacgccctgctctgtaataccaggaaggagctgctcaaccccaacttc
aaaggccttcctgaggacttcagcagtaaggactacaagcccactgcagggccttactgc
ttcatagagcagctgtgtgaactgcatgatggcctggtgctggaggccaaaggggtgaag
gaacacttctggaaacccttcatcagtaggctctttcataagaagattctcaaagggaaa
gaagagagcttgactggcttcttagatcctatgaattttggagacagttctgtgtccata
ggccgtgtgtatgaggagcatgttctggccactggaggtctggatgataggatatttttg
ggagagggcaccccaggcccgtgtctctgtaagggagcggagaaccaggacgcctcagca
tacagactctacaacagtcagactgcctcagtcctgaaggtgtccacttcctttacgggt
cgtaattatgtccaggacaacagtctgtgtatgccggtctctactgccatgcagagtgtt
ggtcgactacacagcctgctcactggactgaagcgcggccccagccggagactcaaagac
ttactgaggtcgtgtgccagagaccccagtgaggtcatctccactaggctgaaggacatg
tgtcagctcttctgccagcactatgagggcaactgggaacagaacgcaggactggggaaa
gacatcgcagtgtacttctgcctggcagaggcgctctactataaaaccctggaggccgtc
attgaccaggagaagaagagactgggcaacttggatctctctggtattctggaacaggat
gtgttccagcgctctctgctggcctgctgtctggagattgtcatcttctcctaccgaccc
ccaggggacttcccacgaatcatacacattttccagctccctgcataccacttttataag
gtgatcgaggtgctggtgcgggtggagcagggtctgttcaggaaggtggtgaagcatctg
aaccaggtggaggagcaggttctggagagcctggcctggagggggggatccccgctgtgg
gacagcgtcaggggggccaagaaccaaccaccctcctgccaggaggtgatgccaccacag
catctggaggatggggacggagccgcccctctcacccccagcaaccatggcactgacctg
ggcgccaactgtggtgggaaaggtgtgtccacctccaccaccaccatgttggaccgctac
agctgccccaccacgggctcggccaggagacggctgtttgtggatgtatcctgcgacgcc
ccctcggacccctccaccaccaacctcactaccaacctcaggacctcccaggccatccct
gctggacagactgtggtcaccatggcaacggccacagttaccgctaacaacggacagacg
gtcaccatacctgtgcaaggaatagccaatgagaacggaggcattaccttcatccctgtc
aaggtaagtgtgacgggacaaggtacgctccagcccctgtctgcccagtccctgactggc
actttgaccagccaaccacagaccaccaccctgaaaagtcccactctccagggcagccac
gccgccggcaagccaatcgagaagccggcagcccagggcccgtccaataacaggcctcag
aaaaagagttccctctcgctgttcttccgcaaggtgtaccacctggccagtgtgcgtctc
agagacatgtgtgccaagctggacatctctagtgagctgcggaggaagatctggacgtgt
ttcgagtactctctggtgcactacacagagctcatgatggaccgacacctagaccagctc
ctcatgtgtgctgtgtacgtcatgaccaaggtgaccaaagaggacaagtccttccagaac
atcatgaagtgttaccgctctcagccccaggctagcagcagcgtctacaggagtgtgttg
atctctgggaggaagagacgtcactcaggaagcagtgagagaaatggacagagctctcct
acagagaccagccatgagggaagtggagacagcagccccgtacccatgcgttccaccagc
gccctacccactcctcagcctggcagcaccccatccacccccaccctggccccctccacc
ttcctctctacatcctcatccctccctccctcccagcagcaggatgatgaagggggagtg
atggtgggggggagggtggaggagcgaggagacctcatccacttctacaaccgggtctac
atcaaacagatgcgccactttgccctgcgctactcgcccagctcatcctctgcagggcta
gagtctcctcccctgtgcctgtacccctccctgaggaccagctcccctcgcagggtcctc
ctgtcccacaaccactccatctatatctccccccataaggctagtgacagcccccccacc
gctaccgcacaggacaagatattctactacatctgcagcggcccagccaaccgcctggcg
gagatcaacagtatgatccgcaccggggagacgcccaccaagaagcgcagtatgcagctg
gaggaggagccatctcccaagaggttgtgtccggacaaccagacagccctcttccgcagg
ctacaagacgtggccaacgatcgtagctcctcccactaa
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