KEGG   Oncorhynchus nerka (sockeye salmon): 115133993
Entry
115133993         CDS       T07952                                 
Name
(RefSeq) retinoblastoma-like protein 2
  KO
K16332  retinoblastoma-like protein 2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04068  FoxO signaling pathway
one04110  Cell cycle
one04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    115133993
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115133993
   04218 Cellular senescence
    115133993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:one03000]
    115133993
Transcription factors [BR:one03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    115133993
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB
Other DBs
NCBI-GeneID: 115133993
NCBI-ProteinID: XP_029523347
LinkDB
Position
LG9a:complement(4790066..4819777)
AA seq 1092 aa
MNEEEAFLQKIRLGFEELCRALNMDVEASNEAWRSYESIRKKYTLEGSDLHWLACAIYVA
CRTPVPTVDKGTAEGNYVSLTRILRCSEQSLIEFFNKIKKWQDMASLPRDFRHSTEKLER
NFTVSAVIFKKYVPIFKAIFKAPSDEPPRVHRSRKQRRHPCTVAEVFNFCWILFVHAKGN
FPMISDDLVNSYHLLLCALDLVFSNALLCNTRKELLNPNFKGLPEDFSSKDYKPTAGPYC
FIEQLCELHDGLVLEAKGVKEHFWKPFISRLFHKKILKGKEESLTGFLDPMNFGDSSVSI
GRVYEEHVLATGGLDDRIFLGEGTPGPCLCKGAENQDASAYRLYNSQTASVLKVSTSFTG
RNYVQDNSLCMPVSTAMQSVGRLHSLLTGLKRGPSRRLKDLLRSCARDPSEVISTRLKDM
CQLFCQHYEGNWEQNAGLGKDIAVYFCLAEALYYKTLEAVIDQEKKRLGNLDLSGILEQD
VFQRSLLACCLEIVIFSYRPPGDFPRIIHIFQLPAYHFYKVIEVLVRVEQGLFRKVVKHL
NQVEEQVLESLAWRGGSPLWDSVRGAKNQPPSCQEVMPPQHLEDGDGAAPLTPSNHGTDL
GANCGGKGVSTSTTTMLDRYSCPTTGSARRRLFVDVSCDAPSDPSTTNLTTNLRTSQAIP
AGQTVVTMATATVTANNGQTVTIPVQGIANENGGITFIPVKVSVTGQGTLQPLSAQSLTG
TLTSQPQTTTLKSPTLQGSHAAGKPIEKPAAQGPSNNRPQKKSSLSLFFRKVYHLASVRL
RDMCAKLDISSELRRKIWTCFEYSLVHYTELMMDRHLDQLLMCAVYVMTKVTKEDKSFQN
IMKCYRSQPQASSSVYRSVLISGRKRRHSGSSERNGQSSPTETSHEGSGDSSPVPMRSTS
ALPTPQPGSTPSTPTLAPSTFLSTSSSLPPSQQQDDEGGVMVGGRVEERGDLIHFYNRVY
IKQMRHFALRYSPSSSSAGLESPPLCLYPSLRTSSPRRVLLSHNHSIYISPHKASDSPPT
ATAQDKIFYYICSGPANRLAEINSMIRTGETPTKKRSMQLEEEPSPKRLCPDNQTALFRR
LQDVANDRSSSH
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgaacgaggaggaagcctttttgcagaaaataaggctggggtttgaagaactctgtcga
gctttgaatatggacgtggaggcgagcaacgaagcatggaggagttacgaaagcataaga
aaaaaatacacattagagggcagtgacctacactggctggcctgtgccatttatgtggcc
tgtagaacaccagtaccaacagtggataagggtactgcagagggaaactacgtctccctg
acccgaatactccgctgttcagaacaaagcctcattgagttcttcaacaagataaagaaa
tggcaggatatggccagtcttcctcgggacttccgccacagcacggagaagctggagaga
aatttcacagtttccgccgtcatcttcaagaaatacgtccccatcttcaaagccatcttt
aaggcgccctcggatgaaccgcccagagtccacaggagccgcaaacagagacgccatccc
tgcaccgttgctgaagtcttcaacttctgctggattctgtttgtccacgctaaaggaaac
ttccctatgatcagtgatgacctagtgaattcgtaccatctccttctgtgtgctctggac
ctggtcttctccaacgccctgctctgtaataccaggaaggagctgctcaaccccaacttc
aaaggccttcctgaggacttcagcagtaaggactacaagcccactgcagggccttactgc
ttcatagagcagctgtgtgaactgcatgatggcctggtgctggaggccaaaggggtgaag
gaacacttctggaaacccttcatcagtaggctctttcataagaagattctcaaagggaaa
gaagagagcttgactggcttcttagatcctatgaattttggagacagttctgtgtccata
ggccgtgtgtatgaggagcatgttctggccactggaggtctggatgataggatatttttg
ggagagggcaccccaggcccgtgtctctgtaagggagcggagaaccaggacgcctcagca
tacagactctacaacagtcagactgcctcagtcctgaaggtgtccacttcctttacgggt
cgtaattatgtccaggacaacagtctgtgtatgccggtctctactgccatgcagagtgtt
ggtcgactacacagcctgctcactggactgaagcgcggccccagccggagactcaaagac
ttactgaggtcgtgtgccagagaccccagtgaggtcatctccactaggctgaaggacatg
tgtcagctcttctgccagcactatgagggcaactgggaacagaacgcaggactggggaaa
gacatcgcagtgtacttctgcctggcagaggcgctctactataaaaccctggaggccgtc
attgaccaggagaagaagagactgggcaacttggatctctctggtattctggaacaggat
gtgttccagcgctctctgctggcctgctgtctggagattgtcatcttctcctaccgaccc
ccaggggacttcccacgaatcatacacattttccagctccctgcataccacttttataag
gtgatcgaggtgctggtgcgggtggagcagggtctgttcaggaaggtggtgaagcatctg
aaccaggtggaggagcaggttctggagagcctggcctggagggggggatccccgctgtgg
gacagcgtcaggggggccaagaaccaaccaccctcctgccaggaggtgatgccaccacag
catctggaggatggggacggagccgcccctctcacccccagcaaccatggcactgacctg
ggcgccaactgtggtgggaaaggtgtgtccacctccaccaccaccatgttggaccgctac
agctgccccaccacgggctcggccaggagacggctgtttgtggatgtatcctgcgacgcc
ccctcggacccctccaccaccaacctcactaccaacctcaggacctcccaggccatccct
gctggacagactgtggtcaccatggcaacggccacagttaccgctaacaacggacagacg
gtcaccatacctgtgcaaggaatagccaatgagaacggaggcattaccttcatccctgtc
aaggtaagtgtgacgggacaaggtacgctccagcccctgtctgcccagtccctgactggc
actttgaccagccaaccacagaccaccaccctgaaaagtcccactctccagggcagccac
gccgccggcaagccaatcgagaagccggcagcccagggcccgtccaataacaggcctcag
aaaaagagttccctctcgctgttcttccgcaaggtgtaccacctggccagtgtgcgtctc
agagacatgtgtgccaagctggacatctctagtgagctgcggaggaagatctggacgtgt
ttcgagtactctctggtgcactacacagagctcatgatggaccgacacctagaccagctc
ctcatgtgtgctgtgtacgtcatgaccaaggtgaccaaagaggacaagtccttccagaac
atcatgaagtgttaccgctctcagccccaggctagcagcagcgtctacaggagtgtgttg
atctctgggaggaagagacgtcactcaggaagcagtgagagaaatggacagagctctcct
acagagaccagccatgagggaagtggagacagcagccccgtacccatgcgttccaccagc
gccctacccactcctcagcctggcagcaccccatccacccccaccctggccccctccacc
ttcctctctacatcctcatccctccctccctcccagcagcaggatgatgaagggggagtg
atggtgggggggagggtggaggagcgaggagacctcatccacttctacaaccgggtctac
atcaaacagatgcgccactttgccctgcgctactcgcccagctcatcctctgcagggcta
gagtctcctcccctgtgcctgtacccctccctgaggaccagctcccctcgcagggtcctc
ctgtcccacaaccactccatctatatctccccccataaggctagtgacagcccccccacc
gctaccgcacaggacaagatattctactacatctgcagcggcccagccaaccgcctggcg
gagatcaacagtatgatccgcaccggggagacgcccaccaagaagcgcagtatgcagctg
gaggaggagccatctcccaagaggttgtgtccggacaaccagacagccctcttccgcagg
ctacaagacgtggccaacgatcgtagctcctcccactaa

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