Oncorhynchus nerka (sockeye salmon): 115134397
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Entry
115134397 CDS
T07952
Name
(RefSeq) NT-3 growth factor receptor-like isoform X1
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115134397
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115134397
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115134397
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
115134397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
ig
LRR_8
Ig_2
C2-set_2
LRR_5
C2-set_3
LRRNT
Haspin_kinase
TrkA_TMD
LRR_4
Motif
Other DBs
NCBI-GeneID:
115134397
NCBI-ProteinID:
XP_029524165
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Position
LG9a:28496039..28755408
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AA seq
829 aa
AA seq
DB search
MDLFFIPPRICWWRVLFLLSIFQDYLSNMLDCPPTCSCSPTEIYCNKSDNGKFFPLLALQ
DTGNNGNNSIEDLFKNITSIHIENWTGLQTLKDVDMELYTGLQRLTIMNGNLRGIQARAF
SQNPHLRYINLSKNPLTTLSWQLFQNLQLFELRLEEVVFECGCDIRWIQLWQQRGEAGLH
TQLLFCNNGASKIPLQAMNISLCDLPDISVTHYNLTVIEGDRVTVTCNGSGSPLPEVDWT
VNDLHSINTHQSNVYWPNVHSINLTLVNVSRDDNFYMLTCIAENKVGMANASIQLTVHFP
PTILKLDEPERRHETCIEFTVRGNPQPTLRWFHRDKEIPPSDYIRTEMDTYQDYLEGCLN
FKDPTHHNNGNYTLEASNFLGVTTKTVYGHFLNAPFSDDYGDYGTPTPTITVTHRPEEDT
FGVSIAVGLAGFACVLLVVLFVLINKYGRRSKFGMKGPVAVISGEEDSASPLHHVNHGII
TPCTLDAGPDAVVIGMTRIPVIENPQYFRHGHNCNKPATYVQHIKRRDIILKRELGEGAF
GKVFLAECYNLSPTKDKMLVAVKTLKDPTLVFSQTLKDPTLAARKDFQREAELLTNLQHE
HIVKFYGVCVDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPLQTNGELGLSQMLH
IATQIAAGMMYLASQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSTDYYRGCVGGHT
MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLANNEVIECITQGRVLE
RPRVCPKEVYDIMLGCWQREPQQRLNIKDIQKILYALGKATPVYLDILG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggatttattttttattccaccacgaatttgctggtggagggtattgtttcttttgagc
atctttcaggactacttgagcaatatgctggactgcccgccaacctgcagctgttctcca
actgagatctattgcaataagtctgacaatgggaaattctttcctttgcttgcactgcaa
gatactgggaacaatggaaataacagcatcgaagatctgttcaagaacatcacctcaata
cacattgagaactggactggcctgcagaccctgaaggatgtggacatggagctgtacact
ggacttcagagactaacgatcatgaacggcaacctgcgcggtatccaggccagagccttc
tcccagaacccccacctccgctacataaacttatcgaagaatcctctgaccacattatca
tggcaactcttccagaatcttcaactcttcgagctgaggctggaagaagtggtgtttgag
tgtggctgtgatatccgctggatccagctatggcagcagcgaggggaggctggcctgcac
acccagctgttattctgcaacaacggagcctccaagatccctctccaagctatgaatatc
tccctctgtgacttgccggacattagtgtgacccactataatctcacagtgattgagggg
gacagagtcaccgtcacctgtaatggatctggatcccccctccctgaggtggactggacc
gtcaatgacctccactccatcaacactcaccagtccaacgtgtactggcccaatgtccac
tccatcaacctgaccctggtcaacgtgagccgtgatgacaacttctacatgctgacctgt
atagcagagaacaaagtggggatggccaacgcctccatccagctcactgtccatttcccc
cccaccatcctgaagctagacgagcccgagcgtcgccatgaaacctgcatagagttcaca
gtgcgcggtaacccccagcctaccctgcgctggttccaccgggacaaggagatccccccc
agtgattacatccgcactgagatggatacctaccaggactacctagagggatgcctcaac
ttcaaggaccccacgcaccacaacaacggcaactacactctggaagctagcaacttccta
ggagtcaccaccaagacagtgtatggacacttcctcaacgccccgttttcagacgattat
ggtgattatgggactccaacaccgaccatcacagtaacacacaggcctgaggaagacaca
ttcggggtgtctattgctgtgggccttgctggatttgcctgtgtccttctcgttgtcctg
tttgttctcatcaacaaatatggccgacgttcgaagtttggaatgaaaggaccagtagca
gtgatcagtggtgaggaggactcggccagtcccctgcaccatgtcaaccatggcatcatc
accccctgtacccttgacgctggaccagacgctgtggtcatcgggatgacccgtatccct
gtcattgagaacccgcagtacttcagacacggacacaactgtaacaagcctgctacctac
gtacagcacataaagcgtcgggacatcattctgaagcgggagctgggagagggggccttt
gggaaggtgtttctggcagagtgctataacctcagccctaccaaggacaagatgctggtg
gctgtcaagacgctgaaggaccccacccttgtattttctcagacgctgaaggaccccacc
cttgcagcgagaaaagatttccagagggaagcggaactattgaccaacctgcagcacgag
cacattgtcaagttctacggcgtgtgtgttgatggagaccccctcatcatggtctttgag
tacatgaagcacggggacctcaacaagtttctcagagcccatgggcccgacgctatgatc
ctggttgacggacagcccctgcagaccaatggggagctgggcctgtctcagatgctgcac
attgccactcagatcgccgcggggatgatgtacctggcctcccagcactttgtgcaccgt
gatttagccactcggaactgcctggtgggcaacggcctgctggtgaagattggtgacttt
ggaatgtccagggacatctacagcacagactactacaggggctgtgtggggggccacacc
atgctgcccatccgttggatgccccctgagagcatcatgtacaggaagttcactacagag
agcgacgtgtggagctttggtgtgatcctctgggagatcttcacctacgggaagcagcca
tggtttcaactggccaacaatgaggtcatcgagtgtattacgcaaggacgggttttggag
aggccacgagtttgtcccaaggaggtgtatgacatcatgttgggttgctggcagagggag
ccccagcagaggctgaacatcaaggatatccagaaaatcctctatgccttgggcaaagcc
acgcctgtctacctggacatcctgggctag
DBGET
integrated database retrieval system
