Oncorhynchus nerka (sockeye salmon): 115135105 Help Entry 115135105         CDS       T07952                                  Name (RefSeq) protocadherin-15-like isoform X1   KO K16500   protocadherin-15 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     115135105  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:one03037]     115135105    04515 Cell adhesion molecules [BR:one04515]     115135105 Cilium and associated proteins [BR:one03037]  Primary cilia and associated proteins   USH complex and associated proteins    115135105 Cell adhesion molecules [BR:one04515]  Cadherins   Protocadherins    115135105 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin PCDH15_12th ECD Ig_CLSTN Cadherin_FAT4_N Cadherin_CELSR2_9th Ig_Cad99C_N Cadherin_2 CDH23_a-b Motif Other DBs NCBI-GeneID:  115135105 NCBI-ProteinID:  XP_029525248 LinkDB All DBs Position LG10:complement(10477094..10739793) Genome browser AA seq 1985 aa AA seqDB search MRRGPCLFRWLGISMALLSLTTYSWAQKTEDWQYEECKLSRSGPPATIVTIDEESPNGTV LVENMQINGRAEDPDRTISLILLDNYAYWVILDPLRQRLFLNSTGRVLDRDPPSSITTIV VKVQCTSELVGTVILHEVRIVVRDKNDNTPRFQQPRYYVAVNELTPAGTTIFTGFSGDNG ATDIDDGPNGQIEYGIQYNPNDPVSNTTVVVGNTLSGNIVLAERLNYEEKTRYLVIVKAN DRAPYDANRRTATTTLTIDVLDGDDLGPMFLPCVLVNNTHDCNPVTYRVTIPEFTKPSEL NPLGVTPPIQAVDMDRNIQPPSKRPGIHYYILVGQPSKYPDYFSLNKTTAELLLLKPVSR DLYTKFTLIIKAEQDNGHPLPAYAELIIDVLDENNQAPYFQFQSYQGYVSESSPVGTTIS ASSNLTAPLGIIALDKDIEESKDPLVTVTLDDFSTSFAITPTGITRYLRLLKPVDREKQM TYTFTMMASDGVQESTRVTVNILVIDANDNTPTFGEVSYSVKVFTDMQQGETVLQLMALD ADEGLNGLVTYEILAGAQGVFIINNRTGRITIAPGIALSVGLSYALTVKAADNAPEIQRR SSITTVYIEVLPPNNQSPPRFPLFIYNLEVSEAMRIGAILLNLQATDRENDPITYQILSG DTQQVFNLSKTIGLLLLGKPLDRETTDQYRLIVTASDGNPGGTSTTTVNIVVTDVNDNDP KFDLTLPRNLTVQEEKANVFVGQVTATDPDAGANGLVRYKIVNHPGLFTITENGSISTVV PLDREVRSQYDLIVEASDGAVDPRRTTFTLSVQVTDIDDNSPEFSQKTYVVNVPENSPVG TVVLRLSAVDADLFSNITYRIKSAEARKLFSVNPISGELLVLQTLDFEDLASMGMGTNYT FQVEAVDQAGTMPPGEATVTVRITDMNDFSPVFSQALYKGLVAPNAEKGTVIATVFAEDQ DPPGTPASLVRYRVDEDQSPYSGSIFDVEKGSGRVITRVNLNEQPSVTFKLVVIAFDDGE PVKENRTLVEITVLQPSRIPIFTQEEYRFAPVSELAPVGTPVGSILAAAMNQTIFYSIVG GNEGGEFQVSNRTGVISTAKPLDYETVTSYVLRVQADSMVVVMAQLRVPSKSNTAKVFIE VRDENDHPPVFTRKLYIGGVAEDAKTFSSVLKIVATDADTGNYSANAYRLIIPPTTDGQD SFVIEQYTGIIKTAIMYRNMRRSYFKFAVIATDNYGKGLSSSADVVVSVVNQLDMQVVVS NVPPTVVEENKEQLIAILERYIQDQIPGAKVVVESIGPRRFGDGFDQEDYTKSDLMVYAI DPLTNRAISRQELFKFLDGKLLDINKEFQPFLGQGGRILEIRTPDIVASVKKAAQAVGYT EGALLALAIIIILCCIPAILIIMVTYKQFKERQAECAKTARIQQALPASKAAAPRAPTAN IYGELGDSSTLQAKRFEIDEADRQRRLSSFACRANSSCGNGSLHSILPKSESNVTFLSDH HPLTTTNPLYDEEEDGNFSSPYGTAKRGSFSPSLSGGSGNVWTMRTRLRGGSEGYESLKR QALMDPAQWELQLLQAGMKGQGSLEGYDVQSSRSTEESKLSVREQARQYEQQAMQERTPR GGRDSRGSLTSPPLLRNQDNIDMLELSAETLFSIMDSPYSPLSIGKDVPPRIIITQGEGS PPLAQRPTLPVLRTSISSYITAEPCEITVEIIPDPPENPPPPPPSPHSPPPHSPPPPPPS QTPHSGPPPPPASSPPPPPSSSPPPAPFNPHFIEPDHSPPPSFPPSPPPARNHAPPPPPP PPPPPLPPPFSPTFERPRHTVQFVPTSLPPLSSLRPISSRAHPPPPHPQPEDGVKRKELK GILKNLQNLADIEKSVANLYSQVDKNRKVARFGKKPQATEGPEGIRRQNRSGSREEPNQP NLTSTEHVVQPNSTTNTNSSDLETSQPGTNNVTSEVQEPSQSNQSNTDSVIEELSNHFPS QSTPF NT seq 5958 nt NT seq  +upstreamnt  +downstreamnt atgcgacgggggccatgtctcttcagatggctggggataagcatggcgctcctctctctg accacctacagctgggcccagaaaacagaagactggcagtatgaggaatgtaaactgtct cggtcaggcccccctgctaccatagtgaccatcgatgaagagagccccaatggcacagtt ctggtggagaatatgcagatcaacgggagagcagaggacccagacaggaccatctctctg atcctgcttgacaactatgcctactgggtcatcctggatcccctcagacagagactgttc ctcaacagcaccgggcgtgtcctggacagagatcccccttcctctatcaccacaatcgtg gtgaaggtccagtgcaccagtgagctggttgggacagtgattcttcacgaggtccggatt gtagtcagggacaaaaacgacaacacacctcgctttcagcagccacgctactatgtggcc gtcaacgagctcactcctgccgggaccaccatattcacaggcttcagtggagacaatggg gccacagacatcgatgacgggcccaacggacagatagaatatggcatccagtacaacccc aatgacccagtgtctaatacaactgtggttgtagggaatactctctctggaaacattgtt ctggctgagagactaaactacgaagagaaaacacgctacctggtcattgttaaagccaat gaccgtgccccgtatgatgccaataggcggaccgctacgaccacattgacaatagatgtt ctggatggagatgacctgggccccatgttcctgccctgtgtcctggtcaacaacacccac gactgcaacccagtcacctaccgagtcaccataccagaattcaccaaaccgagtgaactg aacccactgggggtgaccccgcctattcaagctgtggacatggacaggaacattcagccc ccgtctaaaaggccagggatccattactacatactggttggccagccttcaaagtaccca gactacttctccctgaacaagacgaccgcagagctcctcctcttgaaaccagtcagcaga gacctgtacaccaaatttaccctcatcatcaaagctgagcaggacaatggccacccactc ccagcatacgctgaactgatcattgatgtcctggatgagaacaaccaggctccgtacttc cagttccagtcctaccagggatacgtcagtgagtcctccccagtaggcaccaccatctct gccagctccaacctcactgcccccttgggcataatcgccctggacaaagacattgaagag agcaaagaccctctggtgacggtgactctggatgacttcagcaccagctttgccataacc ccgaccgggatcacccgctacctccgactgctcaaacctgtggacagagagaagcagatg acctacaccttcacgatgatggcatcagatggggtacaggagagcacgcgggtgactgtc aacatcctggtgattgacgccaatgacaacactcccaccttcggtgaagtctcctacagc gttaaggtgttcactgacatgcagcaaggagaaacagtactacagctgatggcattggat gctgatgaggggttaaacggtctggtgacctatgagatccttgccggagcgcagggtgtt tttatcatcaataaccgaactggacgaatcaccatcgcacccgggatagcccttagcgtg ggcctttcttacgccctcacagtgaaggctgcggacaatgcaccagagatccagagaagg agctctatcaccacggtgtacatcgaggtgctgccccccaacaaccagagccccccacgc ttccccctcttcatctacaacctggaggtcagcgaggccatgaggataggagccatcctg ctcaacctacaggccacagacagagagaatgacccaatcacataccagattttgagtggg gatacccagcaagtcttcaacctctctaaaacgataggcctgctgcttttggggaagcct ctggacagggagacaactgaccagtaccgtctcatcgtcactgcctctgatggcaaccca ggcgggacctccaccaccacagtgaacatagtggtgactgatgtaaatgataacgaccct aagtttgacctgaccctgcccaggaacctcactgtccaggaggagaaggccaacgtgttt gtgggtcaagtcacggccacagatccagatgcaggggctaatggtctggtgcgctacaag atagtcaaccacccaggtcttttcaccatcactgagaacggcagcatatccaccgtggtg cctctggaccgagaggtcaggagtcagtatgacctcatagtggaggcctcagacggagcg gtggacccccgcaggaccaccttcaccctctctgtccaggtgacagacatcgatgacaac agcccagagttttcccagaagacctacgtggtcaatgttccagagaacagccctgtgggt accgtggtgctgcgcctcagtgcggtggatgcagacctgttctctaacataacataccgt atcaaatctgcggaggccaggaagcttttctcagtgaacccgatctcgggcgagctgttg gtcctgcagacgctggactttgaggacctggctagtatgggcatggggaccaactatacc ttccaggtggaggccgtggaccaggcagggacaatgccccccggcgaggccaccgtcact gttcggatcacggatatgaatgacttctctccggtgtttagccaagcgctgtacaagggc ctggtggcccccaacgcagagaagggaacggtcatcgccactgtgttcgctgaggaccaa gaccctcctggtactccagccagtctggtgcgttacagagtggacgaggaccaatcacct tacagcggtagcatctttgacgtggagaagggatctgggagggtcatcaccagggtcaac ctcaacgaacagcccagcgtcaccttcaagttggtggtgatagcgtttgacgatggagag ccagtgaaggagaaccgaaccctggtggagatcactgtcctccagccctccaggatcccc atcttcactcaggaggagtacaggtttgctcctgtcagtgagctggccccagtaggcaca ccagtgggcagcatcctggcagccgccatgaaccagacaatcttctactccatcgtggga ggaaacgaaggcggtgagttccaagtgagtaaccggacaggtgtgatctccacggctaag cctctggattatgagactgtcaccagctacgtgctcagggttcaagctgactccatggtc gtggtcatggcccaactgcgggttccctctaaatccaacacagccaaggtgtttatcgag gtgcgggatgagaacgaccacccgcctgtcttcaccagaaagctctacatcggtggcgtg gctgaagacgccaagaccttctcgtctgtgctgaagatagtggccactgatgcagataca gggaactacagtgccaatgcgtaccggctgatcatcccgcccacgacagatggtcaggac agctttgtgatcgagcagtacacgggcatcatcaagacggccatcatgtaccgcaacatg cgcaggtcctacttcaagtttgcagtcatcgccaccgacaactatggaaagggcctgagc agcagcgctgatgtggtggtgtctgtggtcaaccagctggatatgcaggtggtggtgtcc aatgtcccgcccactgtcgtggaggagaataaagagcagcttattgctattctggagcga tacatccaggaccagatcccaggagctaaggtggtggtggaatccattgggccgcggcgg ttcggagatggctttgaccaggaggattacaccaagtcagacctgatggtgtacgccatc gacccactgaccaacagggccatctcacgtcaggagctctttaagtttctggacgggaag ctgctggatatcaacaaggagttccagccgttcctgggtcaaggaggacgcatcctggag atccgtacgcccgacatcgtggccagcgtgaagaaggctgcccaggctgtgggctacaca gagggggcgttgctcgccctcgccatcatcatcatcctctgctgcatccccgccatcctc atcatcatggtcacctacaaacaattcaaagagagacaggcggaatgtgccaagactgcg aggattcagcaggctctgccagcgagcaaggctgctgctccacgtgccccaacagccaat atctacggggaactaggggacagcagcacactgcaggctaaaaggtttgagatcgatgaa gccgaccgccagagacgccttagcagcttcgcctgtcgcgccaactcctcctgtggcaac gggtcgctgcacagcatcctgcccaagtcagagagcaacgtcacctttctgtcagaccac caccccctgaccaccactaaccctctctacgacgaagaagaagacgggaacttcagcagc ccctacgggacagcgaaaaggggctctttctccccctccctctctggagggtccgggaac gtctggaccatgcggactcgtctccgtggagggtcagaggggtacgagtcgctgaagaga caggctctgatggacccggcccagtgggagctgcagctgctccaagctgggatgaagggt caaggaagcctggagggttatgacgtccagagcagccgcagcacagaggagagcaagctg tctgtcagggagcaggccaggcagtatgaacagcaggccatgcaggagaggacccctagg ggagggcgtgactccaggggctccctgacctcccctcctttactgcggaaccaagacaac attgacatgctggagttaagcgcagagaccctgttctccattatggacagcccctacagc cccctgtccatagggaaggatgttcctccccgcatcatcatcacccagggcgaaggctct ccgcccctggcccagaggcccaccctgcctgtcctcaggaccagcatctccagctacatc actgcggagccctgcgagatcactgtggagatcattcctgacccacctgagaatccgcca cctccccctccttctcctcattctcctccacctcattctcctccacctcctcctccttct caaacacctcattctggtcctcctcctcctcctgcctcatctcctcctcctcctccctcc tcatctcctccccctgcacccttcaatcctcacttcattgagcctgatcattctccccca ccctccttccctccatctccccctcctgctcggaatcatgctcctccgccaccaccccca cccccacccccacccctcccgccccctttctcccccactttcgaacgaccccgccacacc gttcagtttgtcccaacctccctgccgccattgtcctcgctccgccctatttcctcccgg gcccatccccctcctcctcacccccaacccgaggacggtgtgaagaggaaggagctaaag gggattctgaaaaacctgcagaacctcgctgacattgagaagtctgttgccaacctctac agtcaagtagacaagaatcgcaaggtggcgcgattcggcaagaaaccccaagcaaccgag ggaccagaaggaattcggagacaaaacagatctgggtcccgtgaggaaccaaaccagcca aacctgaccagcacggaacatgtggtccaaccaaactcaaccacaaacactaactcctct gatctggaaacaagccaaccaggcactaacaatgtaacctcagaggtccaggagccaagc caatcaaaccagtcaaatactgactctgtgattgaggaactaagcaatcactttccatcc caatccacccccttctga

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