Oncorhynchus nerka (sockeye salmon): 115135457
Help
Entry
115135457 CDS
T07952
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
one04510
Focal adhesion
one04518
Integrin signaling
one04519
Cadherin signaling
one04540
Gap junction
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115135457
04020 Calcium signaling pathway
115135457
09133 Signaling molecules and interaction
04518 Integrin signaling
115135457
04519 Cadherin signaling
115135457
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115135457
04540 Gap junction
115135457
09142 Cell motility
04810 Regulation of actin cytoskeleton
115135457
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115135457
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
one04090
]
115135457
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115135457
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115135457
CD molecules [BR:
one04090
]
Proteins
115135457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
VEGFR1-3_N_Ig-like
Ig_2
V-set
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Ig_MYOM1
C2-set_2
MARCKS
Motif
Other DBs
NCBI-GeneID:
115135457
NCBI-ProteinID:
XP_029526016
LinkDB
All DBs
Position
LG10:complement(30861862..30882239)
Genome browser
AA seq
1104 aa
AA seq
DB search
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFTVLLQFCPEVFSLELSPSEKEVILSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEEPFTEEAKD
ISVFVPDPEEWFLPLQQAVVMKEGEEGTIPCVVTDPGINVTLYERASKARVEGTYHPSKG
FTAILKDSSYICRGAMNGEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEMVYFEWDFPRKETFEPLTDFLSEIRIRSFLNISSVTLEDSGQYICRVQHPFSGKSA
MDNLTVTVLERGFVDLEPSININVSALQYQSVALTVQIEAFPKPQVLWTRDNTTLTGETV
SIDTREVHETSYLSTLTLVRVRMEQRGLYTVQVANEDDVKEITFDLQVKSSPKITDLSDQ
HIDQGHGVLCVTEGVPTPTVHWYSCESIGKCSNKTTAWKSLSADQENVSIQMNVSYIEAS
GVNQVRSLLTFQTMGGITSVRCEARNERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLIILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLGHSQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLVDYLHRNKHTFLQYYADKNRRDADMCRNSTESTVQIQ
GKSECDGGYMDMTKEDSLNYVPMQELSDNIKYADIETSVNETPYHQDNNYQGQGQERADV
ALSISDSPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGKTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYTALKRGYRMPKPAHATDEIYDIMCKCWDEKFKKRPLFSSLVNLTGNLLTDAYKK
KYTQVNESFLKSDHHAAIRSKPIPAGNPAVSSDDHSSGDRTGQETGEIEETGTEAGPSQT
DYIIAIPDIHVAEEAEAGGEVLDTATQSTLSPPNTTDQADTASLDGPEAPQEESVPTEEP
VLAPTQEDKLPQSPCTPEVEESFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaggaactctcccaagagtgttatcaattcacactggcactatggagttgggc
ttggcaaagtctctgcctttggtggccatctttacagtgctgctgcagttttgtccagag
gtcttcagtctggagctcagccccagtgagaaggaggtcatactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacctggaagtctccccacgaccccagc
ctggagggagtggctgtggaggacaggggaaccaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagccctttacagaggaggccaaggac
atatcagtgtttgtaccagaccctgaggagtggtttcttcccctgcagcaagcagtagtg
atgaaggagggagaggaaggtaccattccctgcgtggtgactgaccctggcattaacgtg
accctgtacgagagggccagcaaggcccgtgtggagggaacataccaccccagtaaaggg
ttcaccgccatcctgaaagacagctcctacatctgccgaggtgccatgaacggagaggag
aaggcgtcccaggtgtattatgtctacagcattgtggtccccaaatccatgaacgccttc
atgacactctcaaagacggtgctgaaacaaggcgaggccttaatggttaattgtactgta
gaagaagcagagatggtttacttcgaatgggattttcctcgtaaagagacatttgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgttact
ctggaggactctggccagtacatctgccgagtgcagcaccctttttccggaaagtcagcc
atggataatctcactgtcactgttctggaacggggctttgtggatttagaaccctccatc
aacatcaatgtttcagcgctgcagtatcagagcgttgcgctcacagtgcagatcgaagcg
tttcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgta
tccattgacaccagagaggtgcatgagaccagttacctcagtactctgaccttggtaagg
gtccggatggaacagagggggctctacactgtccaggtggccaatgaagacgacgtcaag
gagataacctttgatcttcaagtcaagtcttccccgaagataacagatttgtctgaccag
cacatagaccagggccacggagtgctctgtgtcacagagggggtccccacacccaccgtc
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcatggaagtct
ctgtcggctgaccaagagaacgtcagcatccagatgaacgtcagctacatcgaggcctca
ggggtcaaccaagtccgcagccttttgaccttccagaccatggggggtattacatcagta
cgctgtgaagcccgcaacgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctctgttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcatcatcctcatcgccctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtgagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtatgggaggttccccgggatagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggccacagcctatggccttggtcactctcag
tccaccaccaaagtggctgtgaagatgctcaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacatcgtcaac
ctactgggggcttgtacgaaacgaggtcccatttacctcataactgagtactgttgctat
ggtgacctggttgactaccttcaccgcaacaagcataccttcctgcagtactacgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtacagtccaaatccag
ggaaaaagtgagtgtgatgggggttacatggacatgaccaaggaagattctttaaattat
gtcccaatgcaagagctgagtgacaacatcaagtatgcagacatcgagacttcagtcaat
gagacaccctaccatcaggacaacaactaccaaggacaaggccaagagagagcagacgtc
gcgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaagggcatggacttcctggcatccaagaattgtgttcatcgtgacctggct
gccagaaatgttctcatctgcgagggaaagctggtgaagatctgtgattttggcctggcc
cgtgatgtcatgaacgactccaactacatagccaaaggcaaaacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaatgaacagttctacactgccttgaagagaggctacaggatgcctaaacctgctcat
gctacagacgagatctatgatatcatgtgcaagtgttgggatgagaaattcaagaagagg
ccactcttctcctctctggttaatttgacgggaaacctgctgaccgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagagcgaccaccatgctgcaatcaggtcc
aaacctataccagcagggaacccggctgtgtcttcagatgaccactcctcaggggatcga
acgggtcaggagacaggggagatagaggagactgggacggaggctggcccctcccagact
gactacataatcgccatcccagatatccatgtagccgaagaggcagaagcaggtggtgag
gtgctggacaccgccacacagagtacattaagtcctccaaacacaaccgaccaggctgat
acagcctccctggatggaccagaagcaccccaagaagaatcagtacccacagaggaaccg
gtgcttgcccccacgcaagaagacaagctcccccagtctccatgtacccctgaagtggag
gagagtttcctgtag
DBGET
integrated database retrieval system
