Oncorhynchus nerka (sockeye salmon): 115135592
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Entry
115135592 CDS
T07952
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115135592
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115135592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115135592
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115135592
Intermediate filaments
Intermediate filament-binding proteins
115135592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PAS_8
PH_17
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
115135592
NCBI-ProteinID:
XP_029526298
LinkDB
All DBs
Position
LG10:35201143..35300421
Genome browser
AA seq
2393 aa
AA seq
DB search
MSTISPTDFDSQEIQQQYNDINNRWDLAAETDWDNENSSARLFERSRIKALADEREAVQK
KTFNKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKE
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDVIEFDSLKRSNAHYNLQNA
FNTAENKLGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRVGKVLDYA
IEADQLVGNYESLASELLQWIEQTILTLNDRQLANSLSAVQNQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVDLGAVDAATRKHEAIETDIGAYGER
VAAVEAVARELEAENYHDVRRVLARRDNVLRLWEYLKELLAARRERLNAHRDLQRLLQEM
RSIMDWMGEMKGRLQSQDSGKHLHDVEDLLQTHNLVEADISAQAEGVRGVQGAAQRFTSD
QQVYKPCEPALVGEKVSLLGRAYEELGQLAGERRVRLEDSRRLWQFLWELGEEAAWIREQ
EQILAGGDCGRDLTSALHLLSKHEAFRDEMAARYGPLGNSIAAGQTLVEEGHIGAPECTE
RIRDVRAQWAHLEETSQLREQQLKEAVALHQFQTDANDMEAWILETLRQVSSQEVGHDEF
STQTLARKQREVEEEIQSHRTLIDSLHEQALTLPPVHANAPQVEGRLPAIEQRYHELEAL
SASRRQALEGALALYRMYSEAGACQLWVGEKEQWLDGMQIPTKLEDLEVVQQRFETLEPE
MNNLGTRISDVNQVAQQLLGSDNLSKEQIHQTQDQLNNRWKEFQRLADQRKQALESALNI
QNYHLECNEIQSWMREKTKVIESTESLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLKK
EAETLAEEHPDQAEEIHAHLGEIQEVWQELNATMKRREESLGEASKLQGFLRDLDDFQSW
LSRTQTAVASEDIPTSLPEAERLLSQHESIKNEVDNYKEDYEKMRAVGDEVTQGQTDAQY
MFLAQRLQALDTGWHELRRMWENRHSLLAQAFDFQSFLREVKQAEGFLNSQEYVLSHTEM
PSSLQGAEEAIKKHEDFLTTMEASEEKITGVVEAGRRLVNDLNANSDKIQEKADSIQERH
QKNREAANELLSKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGQALVTEKPELQPVVQQTLEGLQSQWEELENTTRTKAQCLF
DANRAELFTQSCSALDVWLKNLSGQLQSDDFGKDLTSVNILLKKHQMLEHQMEVREKEVQ
SLQSQALALSQEDAGGAVVEVDGQQRRVTDSFSQLQDPLNQRRQQLLASKEAHQFNRDLE
DEILWVKERMPLATSTDHGKDLSSVQLLIKKNQTLQKEIQGHQPRIDDIQTHRRGMSPGQ
EEMDGERRSALEGRLAELRDSWAQLIAETDERHARLVEANRAQQFYTDAAEAEAWMGEQE
LHMMSEEKAKDEQSALVMVKKHQTLEQTLEDYAQPIHQLANSSRTMMTSEHPESERINLR
QAQVDKLYAGLKDLAEERRGRLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEH
VTMLRDKFREFARDTSTIGQERVDGVNGLADDLIESGHPENASVAEWKDGLNEAWADLLE
LIDTRTQMLSASYELHRFHQDAREALGRVREKKEALPSDLGRDLNTVQHLHRQHTAYEHD
IQALSGQVNQVQDDAARLQKAYAGEKAEEIHRSERSVTEAWEGLLGAGQARRHLLLDTVE
KFRFVNMVRDLMLWMDGVNLQIDAHDSPRDVSSAGLVIANHQDIKSEIETRADSFTTCNE
MGHSLINNNHYAADEILEKLDQLQGKRDEISNKWQDKMDHLLIVLEVLQFGRDACVAETW
LAGQEPLVRGAELGSNVDEVESLIKRHEAFEKLAAGWEERFTLLEKLTTLEEQEIQRRRE
EEERARRNPTPPPTEEVAPSEAETHDARTSLDQTTLNQSVSVNGVHSYQDTSQSLSVSSV
SVEKKEKCEPVSKPVSKPKHPLRGSESDSVNGPGRDSGLASSRLDPSATLPSKGDNAGTD
AMEGLLYRKQEMETHAKRAASSFSLSSHRSWQNVYCVLRKGSLGFYKDQKSASGGIPYHG
EVPISLGEAVCEVAHDYKKRKHVFKLRLGDGKEFLFQAKDEPEMASWIHSIHSCIPAGGS
GDRSPGGPRALSRAMTMPPISPSSAEAAGVTMRNKEGKEKDREKRFSFFGKKK
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctctcccaccgacttcgacagccaggagatccagcagcagtacaatgac
atcaacaaccgctgggacctggccgcagagaccgactgggacaatgagaacagctcggca
cgcctctttgagcgctcgcgcatcaaagctctggcagatgagcgcgaagcggtgcagaag
aaaaccttcaataagtgggtgaactctcacctgggccgtgtgacgtgccgcatcggggac
ctgtacactgacctgagagatggacgcatgctcatccgcctgctggaggtgctgtcagga
gaacagctgccgaagcccaccaaggggcgtatgcgtatccactgcctggagaatgtggac
aaggccctgcagttcctcaaggagcagaaggtccacctggagaacatgggctctcacgac
atcgtggacgggaaccaccgcctcaccctgggtctcatctggaccatcatcctccgcttc
cagatccaggacatcagcgtggagactgaggataacaaggagaagaagtctgccaaagag
gccctgcttctctggtgccagatgaagaccgctgggtaccccaacgtcaacgttcacaac
ttcaccaccagctggagagacggcctggcgttcaacgccatcgtgcacaaacacagaccg
gacgtgattgagtttgacagcctgaagcgttccaacgcccactacaacctccagaatgcc
ttcaacacggcagagaataagctgggcctcaccaaactcctggacccagaagatgtcaac
gttgaccagccggatgagaagtccatcatcacctacgtggccacctactaccactacttc
tccaagatgaaggccctggctgtggagggcaagagggttggcaaggtgctggactatgcc
attgaggctgaccagctggttgggaactatgagagcctggcgtcagagctgctgcagtgg
atcgagcagaccattctgaccctgaacgaccggcagctggccaactccctgagcgccgtg
cagaaccagctgcaagccttcaacacctaccgcaccgtggagaaaccccctaagttcaca
gagaaaggcaacctggaggtgctgctgttcaccattcagagcaagatgagagccaacaac
cagaaggtgtacattcccagagagggcaagctcatctctgacatcaacaaggcgtgggag
cgcctggagaaggcggagcacgagcgggagctggcgctgaggaacgagctgattcgccag
gagaagctggagatgctcgccgctcgtttcgaccgcaaggccgccatgagggagacctgg
ctgagcgagaaccagcggctcgtctctcaggacaactttggcgtggacctgggagcggtg
gacgccgcgactcgtaaacacgaggccatcgagacggacatcggggcgtacggggagcgc
gtggcggccgtggaggcggtggccagggagctggaggcggagaattaccacgacgtgcgc
cgtgtgctggcgaggagggacaacgtgctgcggctgtgggagtatctgaaggagctgtta
gccgctcgcagggagagactcaacgcacaccgtgacctgcagagactgctgcaggagatg
agatccatcatggactggatgggagagatgaagggtcgtctgcagtcccaggacagtggg
aagcacctgcatgatgtggaggacctgctgcagactcacaacctggtggaggcagacatc
tcagcccaggcagagggggtccgtggggtccagggagccgctcagcgcttcacctcggac
caacaggtctacaaaccgtgtgagccggcgttggtgggagagaaggtgtctctgctgggc
cgggcctatgaggagctgggccagctggccggggagcggagggtgcgcctcgaggattca
cggcgcctctggcagttcctgtgggagctgggagaggaggcggcctggatcagagagcag
gagcagatcctggctggaggagactgtggccgcgacctcacctccgccctgcacctcctc
agcaagcacgaggccttcagggacgagatggcagcccgctacggccctctgggcaacagc
atcgccgcgggacagaccctggtggaggagggacacattggagccccagagtgcactgag
aggatcagggacgtccgcgctcagtgggcacacctggaggagacgtcccagctgagggag
cagcagctgaaggaggcagtggccctgcaccagttccagacggacgccaacgacatggag
gcctggatcctggagacgctgcgccaggtgtccagccaggaggtgggccacgacgagttc
tccacccagaccttggcccgcaagcagagggaggtggaggaggagatccagagccaccgc
accctcatcgactccctgcacgagcaggccctcaccctgcccccggtccatgcaaacgcc
cctcaggtagagggccgtctgcctgccatagagcagcgttaccacgagctggaggccctg
tctgcgtcgcggcgtcaggccctggagggggcgctggccctctaccgcatgtacagcgag
gcgggcgcctgccagctgtgggtgggggagaaggaacagtggctggacggcatgcagatc
cccaccaaactggaagacctggaggtggtgcagcagaggttcgagaccctggagcctgag
atgaacaacctggggactcgtatctctgatgtcaaccaggtggcccaacagctgctggga
tcagacaacctcagcaaagagcagatccaccagacacaagaccagctcaacaacaggtgg
aaggagttccagcgtctggcggaccagaggaaacaggccctggagtcggccctcaacatc
cagaactaccacctggagtgtaacgagatccagagctggatgagagagaagaccaaggtg
atcgagtccaccgagagcctgggcaacgacctggctggtgtcatggccctgcagcgcaaa
ctcaccggcatggagagagacctggaggccattcagggtaagttggacgacctgaagaag
gaggcagagacgctggctgaggagcacccggaccaggcagaggagatccatgcccacctg
ggggagatccaggaggtgtggcaggagctcaacgccaccatgaagcggcgcgaggagtct
ctgggcgaggccagcaagctgcagggcttcctccgggacctggatgactttcagtcctgg
ctgtcccgcacgcagaccgccgtggcgtccgaggacatccccacctcgctgccagaggct
gagcgcctgctctcccagcacgagagcatcaagaacgaggtggacaactacaaggaggac
tatgagaagatgcgggcggtgggtgacgaggtgactcagggccagacggacgcccagtac
atgttcctggcccagaggctgcaggcgctggacaccggctggcacgagctgcgccggatg
tgggagaaccgccacagccttctggcccaagccttcgacttccagagcttcctgagggaa
gtcaagcaggctgagggcttcctcaacagccaggagtatgtgctgtcccacactgagatg
ccctccagcctgcagggggcagaggaggccatcaagaagcacgaggacttcctgaccacc
atggaggccagtgaggagaagatcacgggcgtggtggaggccggacgccgcctggtcaac
gaccttaacgccaactctgacaagatccaggagaaggccgactccatccaggagagacat
cagaagaatagggaagctgcaaatgaactcctgtctaaactgaaggacaaccgcgaactt
cagcacttcctgcaggacggacaggagctgactctgtggatcaatgagaagatgctgaca
gctcaggacatgtcgtacgacgaggccaggaacctccacagcaagtggcagaaacaccag
gccttcatggctgagctggcctccaacaaagactggctggataagatcgataaggagggc
caggccctggtgacagagaaaccggagctacagcctgtagtccagcaaactctggagggc
ctgcagagccaatgggaagagctagagaacactacacgcaccaaggctcagtgcctattc
gatgccaacagggcagagctcttcacccagagctgctctgctctggacgtgtggctgaaa
aacctgtcagggcagcttcagagcgacgacttcggcaaggacctgacctccgtcaacatc
ctgctcaagaagcaccagatgctggagcaccagatggaggtgcgtgagaaggaggtgcag
tcgctgcagtcccaggcgctggcgctgtcccaggaagatgctggtggggccgtggtggag
gtggacggccagcagagacgtgtcactgacagcttctcccagctccaggaccccctcaac
cagaggcggcagcaactgcttgcttccaaggaggcccaccagttcaacagagacctggag
gatgagattctgtgggtgaaggagaggatgcccctggccacatccaccgaccatgggaag
gacctgtccagtgtgcagctgctcatcaagaagaaccagactttgcagaaggagatccag
ggccaccagccccgtattgatgacatccagacccaccgcagggggatgtccccagggcag
gaggagatggacggggagaggcggtctgctctggagggccgtctggcggagctccgggat
tcctgggcccagctcatcgctgagacggacgagcgccacgcccggctggtggaggctaac
cgcgcccagcagttctacaccgacgctgccgaggccgaggcctggatgggagagcaggag
ctacacatgatgtcagaggagaaggccaaggatgagcagagcgctctggtgatggtgaag
aagcaccagacgttagaacagaccttggaggactacgcccagcccatccaccagctggcc
aacagcagccgcaccatgatgaccagcgaacacccagagagcgagcgtatcaacctacgg
caagcccaggtggacaagctgtacgcagggctgaaggacctggctgaggagcgtcgtggg
cgtctgcaggagaggctgaggctgacccagctgaagagagaggtggacgacctggagcag
tggatcgctgagagggaggtggtggccggatcacatgagctgggacaggactacgaacat
gtcactatgctgcgggacaagttccgcgagtttgctcgggacaccagcaccatcggccag
gagcgcgtggacggcgttaacgggctggccgatgacctcatcgagtcgggtcaccctgag
aacgccagcgtggcagagtggaaggacgggctgaacgaggcgtgggccgacctgctggag
ctgatcgacacgcgcacccagatgctgtccgcctcctacgagctgcaccgcttccaccag
gacgcccgcgaggcgctggggagggtccgggagaagaaggaggcgctgccctctgacctg
ggccgtgacctcaacaccgtccagcacctccaccgacagcacactgcctacgagcacgac
atccaggccctcagcggacaggtgaaccaggtgcaggacgacgcggcgcggctgcagaag
gcctacgccggggagaaggccgaggagatccaccggagcgagcgctctgtcactgaggcc
tgggagggtctgctgggggccggccaggctcgccgtcacctcctgctggacaccgtggag
aagttccgcttcgtcaacatggtgcgtgacctcatgttgtggatggacggggtcaacctg
cagatcgacgcccacgacagccccagggacgtgtcctctgcagggttggtcatagccaac
catcaggacatcaagtctgagatcgagacccgggcagacagcttcaccacctgcaatgag
atgggacactctctcatcaacaacaaccactatgcagctgatgagatcctggagaaactg
gaccagctccagggtaagagggacgagatcagcaacaagtggcaggacaagatggaccac
ctcctgatagttctggaggtgctgcagtttggccgggatgcgtgcgtggcagagacgtgg
ctggcaggccaggagcccctggtgcggggggccgagctgggctctaacgtggacgaggtg
gagagcctgatcaaacgccacgaggccttcgagaagctggccgccggctgggaggaacgc
ttcaccctgctggagaaactgaccacgctggaggagcaggagatccagaggaggagggag
gaggaggagagggcgaggcgaaaccccacaccacccccgacagaagaggtggccccgtct
gaggccgaaacacatgatgccaggaccagcctggaccagaccacactcaaccagtcagta
tcagtcaatggagtccacagctaccaggacacctcccagtcgttatcagtatcatcagtg
tcagtggaaaagaaagagaagtgtgaacctgtctctaaacctgtgtctaagccaaagcat
ccgctgcgcggttctgagtccgactctgtgaatggtccggggagggacagcgggctggcg
tcttcacgcctggacccgtctgccacgctacccagcaagggagataacgctggcacagac
gccatggaaggcctgctctaccgcaagcaggagatggagacccacgccaagagggcagct
agcagcttctctctctcttcccataggtcctggcagaatgtctactgcgttctgcgtaag
ggcagccttggcttctacaaggaccagaagagcgcctccggcgggatcccctaccacgga
gaagtccccatcagcctgggagaggctgtgtgtgaggtggcacacgactacaagaagagg
aaacacgtcttcaagctacggctaggggatggtaaggagttcctgttccaagctaaagat
gagccggagatggcctcgtggatccactccattcatagctgcatcccagcaggggggtca
ggagaccgctcccccggaggccccagggccctgagccgagccatgactatgccccccatc
tcccctagctcagcagaggctgcaggggtcaccatgcgcaacaaggagggcaaggagaag
gaccgcgaaaagaggttcagcttctttggcaagaagaaataa
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integrated database retrieval system
