Oncorhynchus nerka (sockeye salmon): 115136355 Help Entry 115136355         CDS       T07952                                  Name (RefSeq) TAR DNA-binding protein 43-like   KO K23600   TAR DNA-binding protein 43 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     115136355  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:one03019]     115136355 Messenger RNA biogenesis [BR:one03019]  Eukaryotic type   mRNA processing factors    3' end processing     Negative regulators of mRNA 3' end processing      115136355 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RRM_3 RL OB_RNB Adenine_deam_C Motif Other DBs NCBI-GeneID:  115136355 NCBI-ProteinID:  XP_029527807 LinkDB All DBs Position LG2:complement(24602974..24611054) Genome browser AA seq 405 aa AA seqDB search MAELYIRVAEEENEEPMEIPSEDDGSVLLSTVAAQFPGACGLRFRSPVSQCMRGVRLVEG ILHAPENGWGNLVYVVNYPKDNKRKMDEIDAASAVKMKRGDMKTSDLIVLGLPWKTTEQD LKDYFSTFGEVIMVQVKRDVKTGNSKGFGFVRFTEYETQDKVISQRHMIDGRWCDCKLPN SKQGPDEPMRSRKVFVGRCTEDLSADELRQFFMQYGEVTDVFIPKPFRAFAFVSFADDQV ASSLCGEDLIIKGVSVHISNAEPKHGSRQMTERAGRFGNGFGAQGFGSNRTGLGTSASSN MANFGNFSLNPAMMAAAQAALQSSWGMMGMLASQQGQTATSGTASTGQTNSTRDQSQAYS TGNSNYGTNSASLGWGTGSNATASGSGFSSGFGSSMESKSSGWGM NT seq 1218 nt NT seq  +upstreamnt  +downstreamnt atggcagagttgtacattcgtgtggccgaagaagagaatgaggagcccatggagatccct tctgaggacgatggctctgtgttgctttctaccgtggcagctcagtttcctggggcttgc ggcctacgattcaggagtcctgtttcacagtgtatgagaggggtccgtttggtggaaggg attcttcatgcgcctgagaacggctggggcaatctggtctatgtcgtcaattatcccaaa gacaataaaaggaaaatggatgagatcgatgccgcctctgctgtgaagatgaagagaggt gacatgaagacatctgatctgattgtactggggttgccatggaagacaactgaacaggac ctgaaagattacttcagcacctttggggaagtcatcatggtgcaggtgaaacgagatgtg aagactggaaactcaaaggggtttggctttgtgaggtttactgagtatgagactcaagac aaagtgatctcacaacgccacatgattgatggaagatggtgtgactgcaaactccccaac tccaagcaaggtccagatgagcccatgagaagcagaaaagtgtttgtaggccgttgcact gaagacttgtccgctgatgaactgcgacagttcttcatgcagtatggtgaggtcactgac gtcttcatccccaagcccttccgtgcctttgccttcgtcagctttgccgatgaccaggtt gccagttccctatgtggagaggacctgattattaagggggtcagcgtgcacatctcaaat gctgagccaaaacacggcagtaggcagatgacggagcgagcagggcggtttgggaatggg tttggggcacagggctttggtagtaaccgcacagggttagggaccagcgccagtagtaat atggctaattttggcaacttcagtctgaaccctgccatgatggctgctgctcaggctgcc ctacagagcagttggggaatgatgggtatgttggctagtcagcaagggcaaactgccacc tcaggcaccgcctccactgggcagactaactccaccagggatcagagccaggcctacagc acaggcaacagtaactacggcaccaactcagccagtctaggttggggtaccggttctaac gcaacagccagtggtagtgggtttagctcaggatttggctccagtatggagtccaagtct tccgggtggggtatgtga

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