Oncorhynchus nerka (sockeye salmon): 115137495
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Entry
115137495 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: mineralocorticoid receptor-like
KO
K08555
mineralocorticoid receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115137495
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115137495
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115137495
Nuclear receptors [BR:
one03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
115137495
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115137495
NCBI-ProteinID:
XP_029529682
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Position
LG11:43085553..43187081
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AA seq
1040 aa
AA seq
DB search
METKRYPSFFEGSTDTEKNRWSHVPSSAMDYCCSGAEEADSLNLNSNSDVLMDIVNVSCS
PSSNTADSKESNNNNEEKKKPEQQPILKLTQNQHQPFVLPLFNSSIHGRKPEMMDSKELS
KTVAESMGLYMNAAREATDFGGFGQQGGHCSPGKMYPAGVCGRPCLEDSQCAASTGSPKL
MSPSTGFLKQPSSTPGDCCSSGTPSGSAVLGLSLSCSPQAPSSISSPGGSNNLVSSTTSP
TCFGGPFACTTISNPVNQHNAAGPALAHNHVHRRNSATCSPAGSSTVGSPPLTSPLNVMR
SPISSPQSMSSVRSPPSCSTSTNMRSSSVSSPTGSTNNMRASSSISSPTSGGPMAMSSSP
RNPSGGGGGFAVSSPASELGLVQNDSNSPEGRRDQQDFKEFEFPKVVDSVDGGDVQRRPG
TTMGLVKFIRSEPDTDYRSMCLGNGSKNTKCNQATGCPGNGSPFITQIKSEPNKDCGGCM
NPQCYTEQQQQHSMGLFQSGPSEITYLSLRDNIDEYSLSGILGPPGTEMNGSYDAGVFPH
NLLSKVKQENNDGSYYQENNNNVVPTSAIVGVNSGGHSFHYQIGAQGTMSFSRHDPRDHG
TNPLLNLISPVTALMESWKSRPGMSQGPRGEGYPGHGCMPDSMSSASLRHPSSTAKVCLV
CGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRVRKCLQ
AGMNLGARKSKKLGKLKGVNEDSTPTKEGGQTCPGSGGGYLSSGEKELSTSPTNALVPHG
PGGGLVTPYLPPSICSVLELIEPEVVFAGYDNTQPDTTDHLLSSLNQLAGKQMIRVVKWA
KVLPGFRGLPIEDQITLIQYSWMCLSSFSLSWRSYKHTNGQMLYFAPDLVFNEDRMQQSA
MYDLCLGMRQVSQEFVRLQLTYQEFLSMKVLLLLSTVPKEGLKNQAAFEEMRVNYIKELR
RSVGKATNNSGQTWQRFFQLTKLLDAMHDLVGNLLDFCFYTFRESQALKVEFPEMLVEII
SDQIPKVESGNTHTLYFHKK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaaagatacccaagtttcttcgaaggatccacggacacagagaagaacaga
tggtcccatgtccccagcagtgccatggactactgctgcagcggagccgaggaggccgac
agcctgaacctgaacagcaacagtgatgtcctgatggacatcgtcaatgtcagctgctcc
cccagcagcaacacagccgacagcaaggagagtaacaataacaacgaagagaagaagaag
ccagagcagcagcctattctcaaactgacccagaaccaacaccagccttttgttctcccc
ctctttaacagttccatccatgggaggaagccagagatgatggactccaaggagctgtcc
aaaactgtggctgagtccatgggcttgtatatgaacgcggccagggaggccacagacttt
ggcggcttcggccaacaggggggtcattgtagtccggggaagatgtacccagcgggagtt
tgcgggcgcccctgtctcgaggacagccagtgtgctgcgtccacggggagccccaagttg
atgtccccttctacagggttcctgaagcagcctagctccaccccaggggattgctgctca
tctggaaccccatcagggtcagccgtcttgggcttgtctctgtcctgcagcccccaggcg
cccagctccatctccagccccgggggcagcaacaacctagtttcgtccaccaccagcccc
acctgctttggggggccgttcgcctgtacgaccatcagtaaccccgtcaaccagcataac
gctgccggaccagctctggcccacaaccacgtccacagaaggaactcggccacctgcagc
ccggcaggctccagcacggtggggtcgcctccactcaccagccccctcaacgtgatgcgc
tcacccatctccagcccacaaagcatgagcagcgtgcgctccccaccgtcatgcagcacc
tctaccaacatgaggtcatcgtctgtctccagtcccactggcagcaccaacaacatgagg
gcttcatcgtctatctccagtccgacctccgggggccccatggcaatgtcctcaagcccc
aggaacccctctggcggtgggggtggttttgctgtgtccagccctgctagtgaactgggc
ctggtccaaaatgactccaacagtcctgagggacgaagagaccagcaggacttcaaggag
tttgagttccccaaggtggtagatagcgtggacgggggagatgttcaacgtaggcctggg
accactatgggattggtaaagttcatcagaagtgaacccgacacggactataggagcatg
tgtctgggtaatggtagcaaaaacacaaagtgtaaccaggccaccggctgccccggcaat
ggctcacctttcatcacacagatcaaaagtgagccaaacaaagattgcggcggatgcatg
aatcctcagtgctacactgagcagcagcagcaacactctatgggtctcttccagtcaggt
ccgtccgagatcacctacttgtctctgagggacaacattgacgaatacagtctatctggg
atcttgggacctccgggcacggagatgaatggcagttacgatgccggcgtgttcccccac
aacctcctgtctaaagttaaacaagagaacaacgatggcagctactaccaagagaacaac
aacaacgttgtgcccacctcggccattgtgggtgttaattcaggcggacactcgtttcac
taccagatcggagcgcaggggacaatgtctttctcacggcacgacccaagggatcacggg
acgaaccccttgttgaatctaatttcgcctgttaccgcgttaatggagtcgtggaaatct
cggcccggcatgtcgcagggtccaagaggagagggctatccaggtcacggctgcatgcca
gacagcatgtcaagcgcgtcgctgagacacccgtcgtccacagccaaagtgtgtctggtt
tgcggggacgaggcgtcgggatgtcactacggggttgttacatgcggcagctgcaaggtc
ttcttcaagagagccgtagaaggccagcacaactacctgtgtgccggaagaaatgactgt
atcatcgataagatccggaggaaaaactgtccggcctgtcgagtacggaagtgtctccaa
gctgggatgaatctcggagcgcgcaagtctaagaagctaggcaagctgaagggtgtgaac
gaagactcgacccccaccaaggagggggggcagacgtgccctggatccggaggggggtac
ttgtcctcaggagagaaggagctgagcaccagccccactaacgccctggtgccccacggc
cctggaggtgggctggtgaccccctacctgcccccctccatctgcagcgtgttggagctg
attgagccagaggtggtgtttgcgggctacgacaacacccagcctgacaccaccgaccac
ctgctgtccagcctcaaccagctggctgggaaacagatgatccgcgtggtcaagtgggcc
aaagtacttccaggtttccggggcctgcccatagaggaccaaatcaccctgatccagtac
tcttggatgtgtctgtcctccttcagtctcagctggaggtcctacaaacacaccaacgga
cagatgctctacttcgcccccgacctcgtcttcaacgaggaccgcatgcagcagtcagcc
atgtacgacctgtgtctgggcatgaggcaggtgagccaggagtttgtcaggctgcagctc
acctaccaagagttcctctccatgaaagtgttgttgctgctcagcacagttcccaaagag
ggcctaaagaaccaggcagcgtttgaggagatgagagtgaactacatcaaggagctgagg
aggtctgtgggcaaggccaccaacaactctggacagacgtggcaacgcttcttccagctc
accaagctactggacgccatgcatgatctggtggggaacctgctagacttctgtttctac
acgttccgtgagtctcaggctctgaaggtggagtttccagagatgctggtggagataatc
agtgaccagataccaaaggtggagtcgggcaacacacacaccctctacttccacaagaag
tga
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