Oncorhynchus nerka (sockeye salmon): 115137609
Help
Entry
115137609 CDS
T07952
Name
(RefSeq) mediator of DNA damage checkpoint protein 1-like
KO
K01047
secretory phospholipase A2 [EC:
3.1.1.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00564
Glycerophospholipid metabolism
one00565
Ether lipid metabolism
one00590
Arachidonic acid metabolism
one00591
Linoleic acid metabolism
one00592
alpha-Linolenic acid metabolism
one01100
Metabolic pathways
one04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
115137609
00565 Ether lipid metabolism
115137609
00590 Arachidonic acid metabolism
115137609
00591 Linoleic acid metabolism
115137609
00592 alpha-Linolenic acid metabolism
115137609
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115137609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115137609
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.4 phospholipase A2
115137609
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115137609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phospholip_A2_2
MatP_C
Motif
Other DBs
NCBI-GeneID:
115137609
NCBI-ProteinID:
XP_029529785
LinkDB
All DBs
Position
LG11:10592103..10596364
Genome browser
AA seq
713 aa
AA seq
DB search
MADNYDHLGEFAATDSCCRVHDHCPYVIHAFSSKYGYTNFKWHPLSHCDCDNALKECLRK
VNDTSSRVVGQAFFNVIEVPCFQFIYEEQCVERHWYGVCKKYDKLPVAVPRESIPYDFGG
IDVLTVAPQKETNETGTEQDNPVGTTQSTVSGSQTTGPEEPSLRNMVTVAEDFIKFLATV
STSQGSATDNTKGETQTSEKKKRKNTAGKNKKNKKKRKGKGKGRKRKQKIDSVSKGAEES
YQVSPTKAEEVVNKSNFVNEPENDDQLNRNVNRFSDGEKDCGGKEELSNDVMRDEPHVDE
ESAADASDTSATAVKMEQTMLETPALKDHTETASLSATTSTPIVTTQKTKRQRSRKGEGR
KKQSNITPTVTPKGVARHTAITQDLPTTTTESSGTPTIPTSTAIISADQPAQLKLQNHSE
KGHVTVTAGTPIVTFIKSKRHRSKEREKTNKWRKIPPTLPMVGDTFRNPTEKDLEVITTE
STSAAAVTTITTVRVAGQPVSHRPESHNEKGSNTTTTVGSTLSETKRHMLKERERRKMRR
KVISTLLAEGTSLQNPTDDALHTVTTDSTVVLNIPTTTTVVAAEQAEMLTSQSIESHSEK
GLLTRTASDPVMTGRRQGSKERKKSKNVNIPTVVKDEVPINNEIITGTSLTPSASEISFN
VDEVGEFNLQGSEIYREQALREQTSTHTISPIKSTVQKMEKRIGRKKRRKPPQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctgataattacgaccatttgggagagttcgcggcgactgacagttgttgccgcgtt
catgaccactgcccctacgtcatccatgcgttttcctcaaaatacggctacaccaatttc
aagtggcatccgcttagtcactgtgactgcgataatgcgttgaaggagtgtctgaggaaa
gtcaatgacacctcctccagggtggttggccaagctttcttcaatgtcattgaggtgccc
tgtttccagttcatatatgaagagcaatgtgtggagcgccactggtatggcgtgtgtaaa
aaatatgacaagctcccggttgcagtgcctagagagtccatcccgtatgatttcggaggt
attgacgtgctgaccgtggctcctcagaaagagacaaacgaaacaggcacagagcaggac
aatcctgtaggcacaacacagtccactgtttctggctcccagaccactggccctgaggaa
ccctccctcaggaacatggtcacagtcgctgaggacttcatcaaatttctggccaccgtc
tccacctctcagggttcggctacagacaacaccaaaggagagacacagacctcagagaag
aagaagaggaagaacactgcagggaaaaataagaaaaataagaagaaaaggaaagggaaa
ggaaaagggagaaagaggaagcagaaaatcgactctgtctcaaaaggagcagaggagtcc
taccaagttagtcctaccaaagcagaggaagttgtcaataagagtaactttgtaaatgag
cctgagaatgatgaccagttgaacagaaatgtcaaccgtttcagtgatggtgaaaaagat
tgtggagggaaagaagagctttctaatgatgtcatgagagatgaaccacatgtagatgaa
gaaagtgctgcagatgcctctgacacctcagccactgctgtcaagatggagcagacaatg
ctggaaactccggctctgaaggatcacacagaaacagcgtctctttctgcaaccaccagc
acacccattgtgaccacacagaaaaccaaaaggcagaggtcaagaaagggggaagggagg
aaaaaacagagcaacataacgccaactgtcacccctaaaggagttgcacgtcataccgcc
attacacaggacctcccaactaccacaacagagagctctggcaccccgaccatccctacc
agcactgccataatctctgcagatcagcctgcgcaactaaagttacagaaccacagtgaa
aagggacatgttacggttactgccggcacccccattgtgacttttatcaaaagcaaaagg
cacaggtcaaaggagagagagaaaacaaataaatggaggaaaatccctcccactcttccc
atggtgggggatactttccgaaaccccactgaaaaggatcttgaagtgatcactactgag
agcacaagtgctgcagccgtcaccacaatcactactgttcgcgttgcagggcagccagtg
tcacacagacccgaaagtcacaatgagaagggatccaataccactacgactgtaggctca
actttgagtgagaccaaaaggcacatgctgaaagagagagagcgaagaaagatgaggaga
aaagtcatatcaactcttttggctgagggcacatctcttcagaatcccactgacgatgcc
cttcatacagtcactactgacagcactgttgtactgaacatccccacaaccaccactgta
gtcgctgcagagcaggctgagatgctaacgtcacagagcatagagagtcatagtgaaaag
ggacttctcaccagaacagccagcgatcccgttatgactgggagaagacaaggatcaaaa
gagaggaagaaaagtaaaaacgtgaacatacccactgttgtcaaggatgaggttcctatc
aataatgaaataataacaggtacaagtctgacaccctcagcgtcagaaatctcattcaat
gttgacgaagtaggagagttcaatctacagggttctgagatctacagagaacaggccctc
agagaacagaccagcacacacactataagtccaataaaatccactgtccagaaaatggaa
aagagaataggtagaaagaaaaggagaaaaccaccacaatga
DBGET
integrated database retrieval system
