Oncorhynchus nerka (sockeye salmon): 115138681
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Entry
115138681 CDS
T07952
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04620
Toll-like receptor signaling pathway
one04621
NOD-like receptor signaling pathway
one04622
RIG-I-like receptor signaling pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115138681
04621 NOD-like receptor signaling pathway
115138681
04622 RIG-I-like receptor signaling pathway
115138681
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115138681
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
CCDC39
PEA2_C
NOCA1_mid
CEP89
Sina_ZnF
CCDC18_1st
CALCOCO1
zf-RING_UBOX
FapA
Fez1
DUF1664
BLOC1_2
Rod_CreS
DNA_topoisoIV
YonD_C
V_ATPase_I
AAA_13
SKAP
ENTR1
Snapin_Pallidin
Exonuc_VII_L
zf-TRAF_2
DUF7491
Motif
Other DBs
NCBI-GeneID:
115138681
NCBI-ProteinID:
XP_029531657
LinkDB
All DBs
Position
LG12:48366691..48379588
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AA seq
576 aa
AA seq
DB search
MSAGRNADVRELQIPLQHRSPSLAALSLAQRPWPSDPEAGFLPQHGGFWDHFIATPEPKY
CCEACRLVLCNPRQTECGHRFCETCISEQLSKPNPVCPADMEPLFKDKIFRDVCCHREIM
ALRVYCRSEKNGCKEQMSLHQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMHKMAMTELQKHKETVCPSCPVACPNHCTFPSIRRSELTSHQHVCPKAHVTC
SFIRFGCNFMGLNQDMRDHESSFASEHLRLMATRNTTLEAKMEDVKGELLERYKVLPGLS
SRLSETESQYEEMRENNRQLEQKLTTMQNLMSSHSEKLLEMELELRSLRTIREEVETLRG
TVESIRSRVATLEGGRGGAIPATHTLGSLETQLSRQDDMLSVHEIRLADMDLRFQVLETA
SFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLS
LFFVVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIAS
GCPLFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgtgcgggagctgcagatccccctccagcatcgctct
ccctccctggctgctctctctctggcccagcgcccctggcccagcgaccccgaggcaggc
ttcttaccccagcacgggggcttctgggaccacttcatagccaccccagagcccaaatac
tgctgtgaggcctgcaggctagtgctctgcaaccccaggcagacagagtgtggacaccgc
ttctgtgaaacctgcatctccgagcagctaagcaaaccaaatccagtatgtccagcagat
atggagcctttgttcaaagacaagatcttccgtgatgtgtgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgagaagaatggctgtaaggagcagatgagtctacat
caggtcatggatcatttgaatgtgtgtccgtattttgaggtgccatgccctttaggaaag
tgcaaagagaagatgatgcgcaaagacattcctgagcacttgagttggaaatgtaaacac
agagagaccacctgtgaattctgcatgcacaagatggccatgactgaattacagaaacac
aaagaaaccgtttgtccttcatgtccggtggcctgccccaatcattgtacttttccctcc
atacggaggagcgagctgacaagtcatcaacatgtgtgccccaaggctcatgtcacctgc
tcctttatccgctttggatgcaatttcatgggtctcaaccaagacatgagggatcatgaa
tcaagctttgcctctgaacacctgcggctgatggcaaccaggaacactacgctggaggcc
aagatggaggatgttaaaggagagcttctggagcggtacaaggttctgcctggcctaagc
agccgtctgtctgaaacagagtctcagtacgaggagatgagggagaataacagacagctg
gagcagaagctcactaccatgcagaacttgatgagttcccactctgagaagcttttggag
atggagctggagctgaggtctctgaggaccatccgagaggaggtggaaacactacgaggc
accgtggagagcattcgttccagggttgcaacgctagagggaggaaggggcggggccatc
ccagccacacacacactaggttctttagagacacagctctcccgtcaggacgacatgctg
agtgtccacgagatccgcttggccgacatggacctgcgcttccaggtcctagagacggcc
tccttcaatgggacgctcatctggaagatccgtgactacaagcggcggaaacaagaagcc
gtggcgtcaaagaccctgtctctctacagccagcctttctacactggatactttggctac
aagatgtgtgcccgggtctacctgaacggagacggcatggggaaaggaacccacctgtct
ctgttctttgttgtgatgcgtggcgagtacgatgccctgctgctatggccctttaagcag
aaggtgactctgatgctgatggaccagggcccagccaggaagcacctaggggatgccttc
aaaccagaccccaacagcagcagcttcagacgacccacggcagagatgaacatagcctcg
ggctgcccgctgttcgtggcccaaactgtgctggagaacggtacttacatcaaggatgat
accatcttcattaaggtcacagtggacacatctgacctccctgacccttga
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integrated database retrieval system
