Oncorhynchus nerka (sockeye salmon): 115139375
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Entry
115139375 CDS
T07952
Symbol
cad
Name
(RefSeq) CAD protein isoform X1
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00220
Arginine biosynthesis
one00240
Pyrimidine metabolism
one00250
Alanine, aspartate and glutamate metabolism
one01100
Metabolic pathways
one01240
Biosynthesis of cofactors
Module
one_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
115139375 (cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
115139375 (cad)
00220 Arginine biosynthesis
115139375 (cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115139375 (cad)
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
115139375 (cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
115139375 (cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
115139375 (cad)
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
115139375 (cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
115139375 (cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
Amidohydro_1
ATP-grasp_3
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
115139375
NCBI-ProteinID:
XP_029532521
LinkDB
All DBs
Position
LG13:12895887..12918071
Genome browser
AA seq
2246 aa
AA seq
DB search
MATLILEDGTTFKGRLFGANASVSGEVVFQTGMVGYPEALTDPSYMCQILTLTYPLQGNY
GIPQDEESDFGLSKWFESSKIHAAALIVGEVSQNPSHWSSAMSLDQWLKEQGIPGLEGVD
TRRLTKKIREKGTMLGKLVVDGTPEANVPFDNPDQRNLVKEVSMKEPRVFNPSGAVRITA
VDCGIKYNQIRCLCQRGACVTVVPWDHPLDSTDFDGLFISNGPGDPQFCTETIDNVRKVV
CVDNPKPVFGICLGNQLLSLAIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGFAVD
PLTLPQGWDVLFTNANDQTNEGIVHNTKHIFSVQFHPEHMAGPTDLVSLFDVFLDTVRDH
KEGKSGKPVKQRLTEHLTYPGSTNPEEFVRPRKVLILGSGGLSIGQAGEFDYSGSQAIKA
LKEENIQTVLINPNIATVQTSKGLADKVYFLPLTPEYVTQVIKNERPDGVLLTFGGQTAL
NCGVQLTKRGVLKKYAVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAAVSVEQAV
AAAERIGYPVLVRSAFALGGLGSGFANNREELTSLVTSAFAHTSQVLVDKSLKGWKEIEY
EVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRNTAIKVIRHLGII
GECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVLKNSV
TNQTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALR
MVDENCVGFDHTIKPVSDEELQTPTDKRIFVLAAALRAGYTVDRLYDLTKIDRWFLHKMK
NITDHEKVLESYNQDESAMPLEVMRKAKQLGFSDKQIALAVQSTELAVRKMRRDWSILPV
VKQIDTVAAEWPAHTNYLYLTYNGTENDLGFGDPHVIVIGSGVYRIGSSVEFDWCAVGCI
MELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQL
PNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPLWKELTEIESAMKFCE
TAGYPCLVRPSYVLSGAAMNVAYTDSDLEKYLSSAVAVSKEYPVVISKFIQEAKEIDVDA
VACDGVVMAIAVSEHVENAGVHSGDATLVTPPQDINQKTMERIKMIVHAIGQELQVTGPF
NLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATRVIMGEKMEPVGLMKGVGIV
GVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSI
GSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVMAVDWPFGEEESDCPNKDKQ
RNILEYLEDHHFDMVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTKLFV
QALRLVGGFPPVKTHVDCMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGV
TMVCAMPNTAPAIIDPSSFAMVQKLAKAGCRCDYALYVGAASDNSTILPSIANSAAGLKM
YLNDTYSTLKMDNVSMWMEHFEKWPKHLPIVAHAEKQTVAAVLMVAQLYQRAVHICHVAK
KEEILIIRAAKQKGIQVTCEVAPHHLFLCEENVAGIGDGRAQVRPMLGTREDMEALWEHL
DIIDCFATDHAPHSVEEKNSEKPPPGYPGLETMLPLLLTAVSDGRLTIDDIIKRLYDNPR
KIFSLPAQDNTYVEVDLEQEWVIPEHMQFTKSKWTPFEGMKVKGKVRRVVLRGEVAYIDG
QVLVPPGYGEDVKTWPAPIPLLQPLEPVKEVPKTPEHPRLTPPCEGIRTCAQSPRRPTGD
GRYMLPPRVHRSSDPGMTPAAEDSRARALRRAFEEGFREEMAPAAGDGYSHPPPLARILS
PRAEAAAGQPLAHLQTSPVLHPLVGQHVLSVRQFSKEQISHMFNVAHTLRLMVQKERSLD
ILKGKVMASMFYEVSTRTSSSFAAAMQRLGGSVVHFCEATSSSQKGESLADSVQTMSCYA
DVLVLRHPTPGAVESAARHCRKPVINAGDGVGEHPTQALLDVFTIREELGTVNGMTITMV
GDLKHGRTVHSLARLLTQYRITLRYVAPKNLHMPSEIIDFVASKGIKQEEFESIEEALPD
TDVLYMTRIQKERFSSEEEYKACFGQFILSPHIMTGAKKKMVVMHPLPRVNEISAEVDTD
PRAAYFRQAENGMYIRMALLATVLGR
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctgattttagaagatgggaccacgttcaagggccgccttttcggggcaaat
gcgtcagtgtctggtgaagttgtgttccagacaggcatggttggctacccagaggccctg
actgacccgtcctacatgtgtcagatcctcaccctcacctaccctctgcagggcaactat
ggtataccccaggatgaggagagcgactttggactcagcaagtggtttgagtcttctaag
atccacgctgcagccctcatcgtcggagaggtctcccagaaccccagccactggagctca
gccatgtctctggaccagtggcttaaagagcagggcatccctggcctagagggagttgac
acccgtcgtctgaccaagaagatccgtgagaagggtacaatgctggggaagctggttgtg
gacggaacgcccgaggccaacgttccatttgacaaccctgaccagaggaaccttgtcaag
gaggtgtccatgaaggagccccgggtgttcaaccccagtggtgctgtcaggatcacagct
gtagactgtggcattaagtacaaccagatccgttgcctgtgtcagagaggggcctgtgtc
actgtggtgccctgggatcacccactggacagcacagattttgatgggctgttcatcagc
aacggccctggggacccccagttctgtacggagaccatagacaacgtgaggaaggtggtg
tgtgtggacaaccccaagcctgtgtttggtatctgcctgggcaaccagcttctctccctc
gccatcggagcaaaaacctacaagatgaagtatgggaaccgtggccataatcagccctgt
atccacaagggcacagatcgctgtttcatcacatctcagaaccatggctttgctgtggat
cccctgaccctgccacagggctgggacgtgctcttcaccaacgccaatgaccagaccaat
gagggcatcgtgcacaacaccaaacacatattcagtgtccagtttcacccagagcacatg
gcaggccccactgacctggtcagtctgtttgatgtgtttctggacacagtcagagaccac
aaggagggcaagagtggcaaaccagtgaagcagagactgacagagcacctgacctatcct
ggatctaccaatccagaggaatttgttcggccacgcaaagtcctaatcctgggttctgga
ggcctctccatcggacaggctggggagtttgactactctggctctcaggccataaaagca
ttgaaggaggagaacattcagactgtgctcatcaaccccaacatcgccacggtgcaaacc
tccaagggtctggctgacaaggtttacttcctgcctctcaccccggagtatgtcactcag
gtgataaagaatgagcgtccagacggggtcctcctgaccttcggggggcagactgctctt
aactgcggggtgcagctgaccaagaggggagtgctgaagaagtatgcagtgcgtgtgctg
gggacgccggtggcttccatcgagatgactgaggacaggaagatctttgttgagaagatg
gaggagatcaatgaacacgtggcgcccagcgaggccgctgtgtctgtggagcaggcggtg
gcggctgcagagcgtattggctaccctgtcctggtgcgctcggcctttgccctgggcgga
ctgggctctggctttgccaataaccgggaggagttgacctctctggtgacatctgccttc
gcccacacttcccaggtcctagtggacaagtccctgaagggctggaaagagattgagtat
gaggtggtcagagacgcctacgacaactgtatcactgtatgtaacatggagaacattgac
cctctgggtatccacactggggagtccatcgtggtggcgcccagtcagacgctcaacgac
tatgagtacaacatgttgaggaacaccgccatcaaggtcatcagacacctaggcatcatt
ggagagtgtaacatccagtacgccctcaaccctgagtctgagcagtactacatcattgag
gtgaatgcccgtctgtctcggagctcagctctggccagtaaagctacaggatatcccctg
gcctacgtggctgccaagctgggattgggcatcccgctacctgtcctcaagaactctgtg
accaaccagaccacagctaactttgagcccagtctggactactgtgtggtgaaggtccct
cgctgggatctcagcaagttcctgcgcgtcagcaccaagataggtagctccatgaagagc
gttggagaggtgatggccatcggccgcagctttgaggaagccttccagaaggctctacgg
atggtggatgagaactgtgtgggctttgaccacaccatcaaacctgtgtctgacgaggag
ctgcagaccccgacagacaaacgtatctttgttctggcggctgctctcagggcgggctat
acagtggaccgcctttacgacctgaccaagatcgaccgctggttccttcacaaaatgaag
aacatcacggaccatgagaaggtgctggagtcgtacaaccaggacgagagcgccatgcct
ctggaggtgatgaggaaagccaagcagctgggcttctccgacaaacagatcgccctggct
gtgcagagtacggagctggcggtgaggaagatgcgtagagattggagcatcctgcctgtg
gtaaagcagatcgacactgtggcggcagagtggcccgcccacaccaactacctgtacctg
acctataacggtacggaaaacgacctgggctttggagatccccatgtcatagtaattggc
tctggggtttaccgcatcggcagcagtgtggagtttgactggtgcgctgtgggctgcatt
atggaactcaggaagatgggctataaaaccatcatggtgaactataacccagagactgtc
agcacagactacgacatgtgtgaccgtctctacttcgatgagatctcctttgaggttgtg
atggacatctatgagatggagaacccagagggagtgattctgtccatggggggccagctg
cccaacaacatcgccatgtccctccacaggcagcagtgtcgtatattgggcacctccccg
gagttcattgactctgctgagaacaggttcaagttctcccgcatgctggacaccatcggc
atcagccagcccctgtggaaggaactcactgagattgagtcagccatgaagttctgtgag
actgcgggctacccctgcctggtgcgtccctcctacgtgctgagtggagcggccatgaac
gtggcgtacacagacagcgacctggagaagtaccttagcagcgctgtggccgtgtctaag
gaataccccgtggtcatctcaaagttcatccaggaggccaaggagatagacgtggacgcg
gtggcgtgcgacggcgtagtgatggccatcgccgtgtcggagcatgtggagaacgccggg
gtgcactctggggacgccaccctggtcacgcccccccaggacatcaaccagaagaccatg
gagcgtatcaagatgatcgtccacgccatcggacaggaactgcaggtcaccgggcccttt
aacctgcagctcatcgctaaggatgaccagctgaaggtgatcgagtgcaacgtccgtgtc
tcccgctccttcccgttcgtctcaaagactctgggagtggatctggtcgccctggcaacg
cgcgtcatcatgggagagaagatggagcccgtgggcctgatgaaaggagtgggcatcgtg
ggcgtcaaggtcccccagttctcgttctctcgtctggccggagctgatgtggtgctgggg
gtagagatgaccagtactggggaggtggcttgctttggagagaacagatacgaggcctat
ctgaaggccatgctcagcacaggcttcaagattcccaagaagaacattctgctctccatt
ggcagttacaagaacaagagtgagctgctgcctactgttcaggcgctggagagtctgggc
tatgacctgtatgccagtctggggaccgctgacttctacactgagcatggagtcaaggtg
atggcagtggactggccatttggggaggaggagagtgactgccccaacaaggacaagcag
aggaacatcttggaatacctggaggaccaccactttgacatggtcatcaacctctccatg
aggaactctggaggccgacgcctctcctccttcgtcaccaagggttaccgcacccgccgc
atggccattgactactccgtgcccctcatcattgacatcaagtgcaccaagctgtttgtc
caggcgctgcgtctggttggcggcttcccgcccgtcaagactcacgtggactgtatgacg
tcacagaagttgattcgcctgcctggtctgatagatgtgcacgtccacctgcgggagccg
ggtgccacccacaaggaggacttctcctcgggcacagcggctgccctggcagggggcgtc
accatggtgtgtgccatgcccaacacggcacctgccataatcgaccccagctccttcgcc
atggtccagaagcttgccaaggcagggtgtcggtgtgactatgccctttacgtcggagcg
gcttcagacaactccaccatcttgccctccatcgctaactctgccgccgggctgaagatg
tatctgaacgacacctactccactctgaagatggacaacgtctcaatgtggatggagcac
tttgagaagtggcccaagcacctgccaatcgtggcacacgcagagaagcagactgtggca
gctgtcttgatggtggcccagctgtaccagagagctgttcatatctgccatgtggccaag
aaggaggagatcctgatcatccgtgcagccaagcagaagggcatccaggtgacgtgtgag
gtagcgccccaccacctcttcctgtgtgaggagaatgtggcgggcattggggacggccgg
gcacaggtccgccctatgctgggcacccgggaggacatggaggccctctgggaacacctg
gacatcattgactgcttcgccactgaccacgccccccattcagtggaggagaagaactcc
gagaagcccccaccaggttaccccggccttgagaccatgctgccccttctcctcaccgcc
gtcagcgatgggcgcctcaccatcgacgatatcatcaagcgcctgtacgacaacccccgc
aaaattttctcccttcccgcccaggacaacacctatgtagaggtggacctggagcaggag
tgggtcatccccgaacacatgcagttcaccaagtccaagtggacaccctttgaaggcatg
aaggtgaaaggcaaggtccgcagagtggtgctcagaggagaggtggcctacatcgacgga
caggtgctggtccctcctggctatggggaggatgtgaagacttggcctgcacccatcccc
ctcctccagccccttgagccagtgaaagaagtcccaaagaccccagagcacccccggctg
acccctccatgtgagggcatccgtacatgcgcccagagtcctcgccgtcccaccggggac
ggccgctacatgctcccgcctcgcgttcacaggtcctccgacccaggcatgaccccagca
gctgaagattcaagggcgagagcattaagaagagcatttgaagaaggtttcagagaagag
atggcccctgcagctggggacggttacagccatccccctcccctggccaggatcttgtcc
cctcgggctgaggcagcggcagggcagcccctggcccacctccagacctccccagtgctc
caccccctagtgggacaacacgtcctctctgtcaggcagttcagcaaggaacagatctct
cacatgtttaacgtggcccatactcttcgcctgatggttcagaaagagcgaagcctggac
atcctgaagggtaaggtgatggcttccatgttctacgaggtcagcacacgcaccagtagt
tcgtttgcagcggcaatgcagcgtctgggtggctccgtggtccatttctgtgaggccacc
tcttcgtcgcagaagggcgagtctctggcggactcggtccagaccatgagctgctacgct
gacgtcctggtgctgcgacaccccacgccaggggctgtggagtctgcagcgaggcactgc
cggaagccggtgatcaacgctggggacggggtcggggagcaccccacgcaggccctgcta
gatgtgttcaccatcagagaggagctgggtacggtcaacggcatgacgatcaccatggta
ggggacctgaagcatggccgcacagttcattccctggccaggctgctcacccagtacagg
atcactctgcgttacgtcgccccaaagaatctccacatgccctccgagatcattgacttt
gtggcctccaaaggcatcaagcaggaagagtttgagagcatcgaggaggccctgcctgac
actgacgtcctctacatgaccaggattcagaaggagaggttttcctcagaggaagagtac
aaagcgtgcttcggtcagttcatcctcagcccacacatcatgactggagcgaagaagaag
atggtggtgatgcatcctctaccgagagtcaatgagatcagtgcggaggtggacactgat
cctcgtgctgcctacttccggcaggctgagaacggcatgtacatccgcatggccctcttg
gccactgtgctgggcagatga
DBGET
integrated database retrieval system
