Oncorhynchus nerka (sockeye salmon): 115139515
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Entry
115139515 CDS
T07952
Name
(RefSeq) dermatan-sulfate epimerase-like isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115139515
Enzymes [BR:
one01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
115139515
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSE-like_N
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
115139515
NCBI-ProteinID:
XP_029532865
LinkDB
All DBs
Position
LG13:19034294..19062090
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AA seq
959 aa
AA seq
DB search
MRTYTRGAPTVFFISLLWPLVAPVVGVAEETIDPSGGIPFMGGNYDGHPMLYFGQGEVEE
LQSAAAGTHREMAARIREAGEAMLEHPEDYLPPWSPAEFSARWNEVYGNNLGVLSMFCLL
YPHRAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLSKVQQE
RFLQVIGNATRYMYEKSYIRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQ
VLAIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSISHFDHPWLHKHFA
FMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAEMIHQNRVLEGP
GQAGKGQRWCTLHTEFLWYDPGLTPRAPADFGTSQLHYFEDWGVVTYGSSLPADTNHTFL
SFKSGKLGGRAIFDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGP
KYTFLNNAVLFSPATSGSCFKPWDGQVTEACDSKWLKYKVGLPADAQGRVEAALERQGMV
FIRGEGQSAYNPDLKIRSFQRNLLLLHPQLLVLVDHIHLETDSPTRAMSAFFHNTDLPFK
DTKIDGVHGAFVRHGEDPYQMFWMDDTGFSEKGVLGYWNYPRGYPYNGSNYVNVTMPLRY
PHTRVAYIFFGPGVDVQSFSLRGDANRVDIYLATNEHTYTIYLLTGEVTTKPLFAMVLVD
QKKIVFEKAAGVKNSTPEEVEEYVNVVEDNLQHAKPVFQQLERHILGRVLNTASFRKTAE
RLLQFSDKKKTEAIEKMFALTKKQGKGKGANKALGNLGDKLSESLPDIFGQIEVKEKKER
SKTTKRIIEESPEEDGDSRAFMDYGDSKKARKGGFVKGRKFKEVHELATANSDSLSNSSS
YIRLFLILNIATFFLLLSVLLTRFQRGRSLHTQRCFYGILLIDSFILLCLYSSCSHAQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctacacccgaggggcccccacagtgttcttcataagtctactgtggcccctg
gtggccccggtggtgggggtggcggaggagacgatagaccccagtggagggatacccttc
atgggagggaactacgatggacaccccatgctgtacttcggccagggcgaggtggaggag
ctgcagtcggcggcggctgggacacaccgggagatggccgcgaggatccgcgaggcgggg
gaggccatgctggagcaccctgaggattacctgcccccctggagcccggccgagttcagc
gcccgctggaacgaggtgtatggaaacaacctgggagtgttgtctatgttctgtctgctc
tacccacacagagccggggccctcgacctggccaaggattacatggagaggatggcagct
cagcctagttggttggtaaaggatgctccctgggatgaggttcctctagcccactctctg
gttggcttcgccacagcgtatgatttcctgtatgagtacctgagcaaggtgcagcaggag
cgcttcctgcaggtgatcggcaacgctacacgctacatgtatgagaagtcctacatccgc
ggctggggcttccagtacctgcacaaccaccagcccaccaactgtgtggctctcctcacc
ggcagcctggtttacatgacccagggttacctgcaggaggcctacctgtggaccaagcag
gtcctggccatcatggagaagtctatggtgctgctgcaggacgtgacggatggctcgctg
tatgagggcgtggcctacgggacgtacaccacccgctctcttttccagtacatgttcctg
gtgcagagacacttctccatcagccacttcgaccacccctggctccacaaacactttgcc
ttcatgtacaggaccatcctgccagggttccagaggactgtagccatagcagattccaac
tacaactggttctacgggcccgagagccagctggtgttcctggatcgctatgtgatgagg
aacggcagtggaaactggctggctgagatgatccatcagaaccgggtgttggaggggccg
ggacaggccgggaagggacagagatggtgcacactgcacacagagttcctctggtatgat
cccggcctgactcccagggctcctgcagactttggtacatcccagctccactactttgag
gactggggggtcgtcacttatggaagttctctacccgcagacaccaaccacaccttcctc
tcctttaagtcggggaagctgggtggacgggccatatttgacatcgttcacaggaacaag
tacaaagactggatcaaagggtggcggaactttaacgctggccacgagcaccctgaccag
aacagctttacgttcgcccctaacggtgttccttttatcacggaggctctgtacgggccc
aagtacaccttcctcaacaacgcagtgctgttctccccggctacctcgggaagctgcttc
aagccatgggacggccaggtcacagaggcctgcgactccaagtggctgaagtacaaggtg
gggctgccggcggacgcccagggcagggtggaggctgctctggaaaggcagggcatggtg
ttcatccgtggggagggccagtcggcctacaaccctgacctgaagatcaggagcttccag
aggaacctgctgctcctgcacccccagttgctggtcctggttgatcatatccatctggag
acagacagcccaaccagggccatgagtgccttcttccacaacacggacctgccctttaag
gacaccaaaatagacggtgtgcacggagcctttgtcagacatggggaagacccatatcaa
atgttttggatggatgacacaggcttcagtgagaaaggggtcttggggtactggaactat
ccccgtggttacccctataacggctctaactatgtgaatgtgacaatgcctctgaggtat
ccccataccagggtggcctacatcttctttgggccaggggtggacgtgcagagctttagt
ctgcgtggcgatgctaacagggtggacatttacctggccaccaacgagcacacctacacc
atctacctgctgaccggggaggtgaccaccaagcctctgttcgccatggtgctggtggac
cagaagaaaatagtatttgagaaagcagcaggagtgaagaacagcacgccggaggaggta
gaggagtatgtcaacgtagtagaggacaacctccagcacgccaagcctgttttccagcag
ctggagagacacatcctgggccgggtgctcaacacggccagcttccgcaagacggccgag
cgcctcctccagttctccgacaagaagaagacggaggccattgagaaaatgtttgctctg
actaagaaacagggcaagggcaagggggccaataaagccttggggaaccttggggacaag
ctctcagagagcctgccggacatctttggacagatcgaggtaaaggagaagaaggagaga
tcgaagacaacaaagaggattattgaggagagccccgaggaagacggcgactccagggcc
tttatggattatggagactccaaaaaagcccggaagggaggcttcgtgaagggtcgcaag
ttcaaggaggtccacgagttggcgacggccaacagtgacagtctgtcgaactcatcctct
tatatcagactatttctcatcttaaacatagccaccttcttcctgctactgtctgtgtta
ttgacacgcttccagagaggcagaagtctgcacacccagaggtgtttctatggcatcctg
ctcatcgacagcttcatcttactctgcctctactcctcctgctctcacgcacagtgttga
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