Oncorhynchus nerka (sockeye salmon): 115139734
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Entry
115139734 CDS
T07952
Name
(RefSeq) ras GTPase-activating protein 1-like isoform X1
KO
K04352
Ras GTPase-activating protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115139734
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115139734
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Gene cluster
GFIT
Motif
Pfam:
SH2
RasGAP
PH
C2
SH3_1
SH3_9
SH2_2
PH_11
PH_RASGAP
DUF7656
Motif
Other DBs
NCBI-GeneID:
115139734
NCBI-ProteinID:
XP_029533306
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Position
LG13:37539594..37592077
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AA seq
1081 aa
AA seq
DB search
MMAAEVSSEDTGSVSAGKGVAGGGGPETAHFPFYPNPTRVRVTDLGQGAATNLRHPLNTS
PDSPPDISMIYPVSGGDTAGPALSATGSGGHAIIIGTSSGTIGNVCYSPTSEGPGIRMSP
TSVGPDGSSVFPPLPPPPPPPPGYGGLGTVDESDMQDGPEYEEEEVVFPLSAPPTNQWYH
GKLDRTIAEERLRQARTPGSYLIRESDRRPGSFVLSFLSMTSVVNHFRIIAMCGDYYIGG
RRFSSLSDLIGYYSFVSCLLKGEKLLSPVAPPEPVEDRRRVRAILPYTKVPETDEISFLK
GDMFIVHNELDDGWMWVTNVRTEEQGLIVEDLVEEVGREEDPHEGKVWYHGKISKQEAYN
LLMTVGQVSSFLVRPSDNTPGDYSLFFRTNENIQRFKICPTPNNQYMMGGRYYNSVDDII
EHYKKEQIVEGYNLKDAVSVQQQEQVLSDLVDGKEIYNTIRRKTKDAFYKNIVKKGYLLF
NKGKGKRWKNLYFILEGNDAQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQ
VVIQHFSEEQYIFYFAGETPEQAQDWMKCLQTFCSNLRKPTQPTPNKRLRQVSSLVLYVE
EAHKLPVKHFTNPYCNIYLNSVQVAKTHPREGQNPVFTEEFIFDDLSSEINRFEISLSNK
TKKSKESDILFMRCQLSRLQKGQMIDEWFPLSSHVPLKGIEPGSLRVRARYSMEKIMPEE
EYSEFKELILLKEFHVIYALAHVCGQDRTLLASILLRIFRHEKTEAPLLRTLNDREINME
DEATTLFRATTLASTLMEQYMKATATPFVHHALKDTILKIMESKQSCELNPSKLEKNEDV
NLNLAHLLNILSELVEKIFMAAEILPPVNRLSSVIDDDVPIDDGCQSLSSPDDIIHRPNP
NKTLRYIYGCLQKSVQQKWPTNTTMRTRVVSGFVFLRLICPAILNPRMFNIIADPPSATA
GRTLTLIAKSVQNLANLVEFGAKEPYMEGVNPFIKNNKHRMIMFLDELGNVPDLPEVTEH
FRTDLSRDLAALHEICVSHSDDLRTLSNERGAQQHVLKKLLAITELLQQKQVHYAMSNSN
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcggaggtcagtagcgaggatacgggctctgtctcggcagggaaaggggtg
gcgggcggtggaggcccagagacggcccattttccgttttatcccaacccgaccagagtg
cgggtcactgatttgggccagggagctgcaacaaacctccgccacccgttgaacacctcc
ccagactccccccctgatataagtatgatttaccccgtgtctggaggagatactgctgga
cctgccttgtccgctacagggagtggcggacatgcaattattataggaacaagttcaggg
accattggcaatgtgtgttactcccccacctcggagggacccggcatccggatgtcaccc
acctcggtgggtcccgacgggtcaagtgtcttcccccctctgccaccacctcccccaccg
cccccaggctacgggggactcggaactgtggatgaaagcgacatgcaggatggacctgaa
tacgaggaagaggaggtggtcttccccctctcagcgccgcccacgaaccagtggtaccat
gggaagctggaccggaccattgctgaggagcggttgcggcaggccaggacccccggcagc
tacctcatcagggagagtgaccgccggcccggctcctttgtcctgtcctttctcagcatg
accagtgtggtcaaccacttcaggataatcgccatgtgtggagattattacataggcggg
cggcggttctcgtccctgtcggacctgattggttattacagcttcgtgtcttgcctgctg
aaaggtgaaaagctgctatcgcccgtggcacccccagaacctgtggaggacaggaggaga
gtgagagccattcttccatacaccaaagtgccagagaccgatgagatcagcttcctgaaa
ggggacatgtttatcgttcacaatgaactggatgacggctggatgtgggtgaccaacgtg
aggacggaggagcagggcctcattgtggaggacctggtggaggaggtgggacgggaggag
gacccacacgagggcaaagtttggtatcacggcaagatcagcaaacaagaggcctacaac
ttgctgatgacagttggccaagtgtccagcttcctggtccggccgtcagacaacacaccc
ggggactactccctgttttttcgcaccaatgagaacatccaaaggtttaagatatgcccc
acgcccaacaatcagtacatgatgggggggagatactacaacagtgttgatgacattatt
gagcattataagaaagagcagatcgtggagggctacaacctgaaagatgctgtttcagtg
cagcaacaggaacaagtgctttcagacttggtggacggcaaggagatctataacactatc
agacggaaaacgaaagacgccttctacaaaaacattgtcaagaaaggctacctcctattc
aacaaaggcaaaggcaagcgctggaagaacctctacttcatcttggaggggaacgacgcc
cagctcatctactttgagagtgagaagagggccactaaacccaaaggcctgattgacctg
agcgtgtgctcggtgtacggcgtgcacgacagtctgtttggcaggccaaactgtttccaa
gttgtgatccagcactttagtgaggaacagtacatattctactttgctggcgagacccct
gaacaggcacaggactggatgaaatgtctgcagacgttctgcagtaaccttaggaaaccc
acccagcccactcccaacaagaggctccgacaggtgagcagtctggtcctgtacgtggag
gaggcccacaagctgccagtgaagcacttcaccaacccctactgcaacatctacctgaac
agtgtgcaggtggctaagacccaccctcgagagggccagaacccagtcttcactgaggag
ttcatctttgatgacttgtcgagtgaaatcaacaggtttgaaatcagcctgagtaacaag
acaaagaagagcaaagaaagtgacatcttattcatgcgttgccagctgagccgactgcag
aagggccagatgatagacgagtggttccctctaagctcccacgtgcctctgaagggcatc
gagccgggctccctgagggtgcgagcccgctactccatggagaagataatgcctgaggag
gagtacagcgaattcaaagagctgatcctgctgaaagagttccatgtgatctatgctctg
gcccatgtgtgtgggcaggaccgcaccctgctggccagcatcctgctgcgcatcttcaga
cacgagaagacagaggcccccttactcaggacactcaatgaccgagagatcaacatggag
gacgaggcgacgaccctgttccgagcgaccacgctggccagcacgctgatggagcagtac
atgaaggccacggccacacccttcgtccaccacgccctcaaagacaccatccttaagatc
atggagagcaagcagtcctgcgagctgaatccctcaaaactggagaaaaacgaggatgtg
aatctaaacctagcccacctcctcaacatcctgtctgagctggtggagaagatcttcatg
gctgctgagatcctgccccctgtaaataggctatcatctgtcatcgacgatgacgtcccc
atcgacgatggctgtcaatcattatcgtcacccgatgacatcattcatcggcccaaccct
aataagactctaaggtatatctatgggtgtctgcagaaatcagtgcagcagaaatggccg
accaacaccaccatgagaaccagagtcgtaagtggctttgtgttcctgagactgatctgt
cctgccatcctcaacccaagaatgttcaacatcattgctgaccctccctctgcaacagca
ggccgtaccctcacattgattgccaagtctgtccagaacctggctaacctggtggagttt
ggtgctaaggagccctacatggagggtgtgaaccccttcatcaaaaacaacaaacatagg
atgatcatgtttctggatgagttggggaatgtccctgacctccctgaagttacagagcac
tttaggacagacctgtcccgtgaccttgcagccctgcatgagatctgtgtctctcactca
gacgatctccgcaccctgagcaacgagaggggagcacagcagcacgtgctgaaaaagctg
ctggccatcactgagctccttcagcagaaacaggttcactatgccatgtccaacagcaac
aggtag
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