KEGG   Oncorhynchus nerka (sockeye salmon): 115139825
Entry
115139825         CDS       T07952                                 
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1-like
  KO
K10144  RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04115  p53 signaling pathway
one04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115139825
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    115139825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115139825
Enzymes [BR:one01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115139825
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115139825
SSDB
Motif
Pfam: zinc_ribbon_6 zf-CHY zf-RING_2 zf-C3HC4 zf-RING_5 Prok-RING_4 zf-RING_11 zf-RING_4 DUF8149
Other DBs
NCBI-GeneID: 115139825
NCBI-ProteinID: XP_029533499
LinkDB
Position
LG13:42810967..42817168
AA seq 279 aa
MFADRQKYHRRRRRMASLVGCEHYVRRCLLKAPCCGKAYVCRLCHDAEEDHQMDRFLVKE
VQCSVCTTVQQAQQTCVECNVTFGEYYCDICHLFDKDKKQYHCQPCGICRIGPREKYFHC
EKCNLCLAGDLRGNHKCVENVSRQNCPVCMEDIHTSRIGAQILPCGHLLHKTCFDDMVQT
GAYRCPLCMHSAWNMEHNWEQMDKEITQSPMPTEYQDATVKIICNDCQTHCTVPFHVLGM
KCGGCGSYNTAQNGGLIRQSREPQPQEPEQQPQSPLPEP
NT seq 840 nt   +upstreamnt  +downstreamnt
atgtttgcggaccgccaaaaataccatagaagaagaagaagaatggcttccctggttgga
tgtgaacactacgtgcgccgttgtttgttgaaagctccgtgttgtggtaaagcatacgtt
tgtcgcctgtgccatgacgctgaggaggaccatcaaatggaccgcttcctggtcaaagaa
gtgcagtgctcagtctgcacaacagtacaacaggcacaacaaacttgcgtggagtgtaat
gtgacctttggggaatattactgtgatatttgtcacctgtttgataaagacaagaagcag
tatcactgtcagccctgtggaatttgcaggattggaccaagggagaaatacttccactgt
gagaagtgcaatctctgtttagcaggagatctaagaggaaatcacaagtgtgttgaaaat
gtttcaagacagaactgcccagtgtgtatggaggatatccacacatccagaataggagcc
caaattcttccatgtggccatcttctacacaaaacatgctttgatgacatggtccaaact
ggtgcgtatcgatgcccactctgtatgcactctgcttggaatatggagcacaactgggag
cagatggacaaggagatcactcagtcacccatgcccactgaataccaggatgccactgtg
aagatcatatgtaatgactgccaaacccactgtacggtgcctttccatgttctgggaatg
aagtgtggtggctgtgggtcctacaacacagcccagaatgggggactgatacggcagtcc
cgggaaccacagccccaggagccagagcagcagccccagtccccattgccagaaccatag

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