KEGG   Oncorhynchus nerka (sockeye salmon): 115140152
Entry
115140152         CDS       T07952                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18-like
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115140152
   03400 DNA repair and recombination proteins [BR:one03400]
    115140152
Enzymes [BR:one01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115140152
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115140152
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    115140152
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_6 SAP zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_10 zf-rbx1
Other DBs
NCBI-GeneID: 115140152
NCBI-ProteinID: XP_029534169
LinkDB
Position
LG2:complement(42654934..42768781)
AA seq 534 aa
MANLNEADLPPNLTCLKNVDTILRCPICFEFLSIAMMTKCSHNFCSLCIRKFLSYKLQCP
VCNSPTTEQDLRNNRILDDLVTNFKSARQQLSNANFDSPPISRKAPASSVKCKKPRQSTA
PKKEASIFNHFFRKGPTTSTTSLTTEATPAQQPIPCRKRLSDTPLRSQTVKEGPRPTQTV
KVDPDHQVSVKEEPIEDILPQVLVSVKMEKIDFSMTGLASLADSQSSSQDLKPLVKVECP
VCSVGILEQFINKHLDSCLTQGEKKESLRSSLGAKRKPMRKLVYTLLSMQELKKRLKECH
LSAQGTRDQLVRRHQDFVHFYNAQCDALEPKSAKDIAKEVEANEKARNQLQGKTKCAMVF
SKNQSLGQIDEMHSTYRKQHNSEFSRLIAQVRGRLETARTREIKQEVRDEGGEEDQGVGS
SSADRAAQQEQSDPSPSDSEACCVLMTSPVEEPSEKQQQPSVVAVISRSPSPCLSEVSIS
SSVSDIFAGRCYEVLENTSSGKWASYSKEEDSSLPLVLGKRARKTWEEDRKESS
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggccaatttgaatgaagctgatttaccaccaaatctgacttgcctcaaaaatgttgat
accattctccgatgtcccatttgtttcgaattcctgagtatcgcaatgatgaccaaatgc
tctcacaacttctgctctttgtgcataagaaaatttctgtcctacaaattacaatgtcca
gtatgcaattcacctacaacagaacaagacctaagaaacaaccggatactggatgacctg
gtcacaaactttaaatctgcaagacagcagttgtcaaatgctaattttgactcgcctcca
atatcccggaaggccccggcctcatctgtcaagtgtaaaaaacctagacagtcaacggcc
cccaagaaggaggcctccatcttcaatcactttttccgaaagggtcccaccacctccaca
acttctctcactacagaggccacgccagcacagcaacctattccatgcagaaagagactg
tctgacactcctctacgtagtcaaactgtgaaggagggcccccgtcctacacagactgtg
aaagtagaccctgatcatcaggtctctgtgaaggaggagcccattgaggacatactgccc
caggtgctggtgtctgtaaagatggagaagattgacttctccatgacagggctggcgtcc
ctggctgattcacagtcctcatcacaggacctgaagcctctagttaaagtggagtgtcct
gtgtgttctgtgggcatccttgaacagttcatcaacaagcacctggacagctgtctgacc
caaggggaaaagaaggagagccttaggagctccctaggtgccaagaggaagccgatgagg
aagctggtatacacactgctgtccatgcaggagctgaagaagaggctgaaggagtgccac
ctctctgcccagggcaccagagaccagctggtcaggaggcaccaggactttgtacacttc
tacaatgcccagtgcgacgccctcgaaccgaaatcagccaaagacatcgccaaagaagtg
gaggccaacgagaaggccaggaaccaactgcaggggaaaaccaaatgtgctatggttttc
tctaagaaccaaagtctggggcaaatcgatgagatgcattcaacttacaggaagcagcat
aacagtgagttctcccgccttatcgcacaggtccggggtcgcctggagactgcgaggacg
agggagataaagcaggaagtgagggatgagggaggagaggaggaccagggagtgggctcc
agctctgcagatagggcagcacaacaggaacagagtgatcccagccccagtgactcagag
gcctgctgcgtattgatgacatcacctgtggaggagccctctgagaagcagcagcagcct
tctgttgtagcagtcatctccaggtcacccagcccatgtctcagtgaggtgtccatcagc
agctccgtctccgacatcttcgctggcagatgctatgaagttttggagaacacctcgagt
gggaaatgggcttcctactccaaggaggaagactcttctctgccacttgtcctgggaaaa
cgagcccggaaaacctgggaagaggacaggaaggagtcgagctga

DBGET integrated database retrieval system