Oncorhynchus nerka (sockeye salmon): 115140167
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Entry
115140167 CDS
T07952
Name
(RefSeq) DNA polymerase kappa-like isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115140167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115140167
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115140167
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
115140167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
zf-C2H2_12
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115140167
NCBI-ProteinID:
XP_029534200
LinkDB
All DBs
Position
LG13:54500520..54514401
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AA seq
969 aa
AA seq
DB search
METGGTSSSGEGFLSRMALNDNKAGMEGLDRDKINKIIMKSSKGSRFYENEMKKEQQVNQ
RIERMMLQKAHITEQQLSKAQTQVEKMTFDLERVRDLSRVIVHVDMDAFYAAVETRDCPD
LKDKPMAVGSMSMLTTSNYHARKFGVRAAMPGFIAKKLCPNLVIVPTDFDKYRAVSAEVQ
EIFADYDPHFLPMSLDEAYLDISEHLEQRRVWPEALRTHRLRTNDTGTATSVSVPVEEQG
DGLQETVEGLSPVLFEDSPSSSCPFLQDAPGGDVMVFGTCAEEAVREMRFRIEQKTSLTA
SAGIAPNMMLAKVCSDKNKPNGQYRLPSNRQAVMVFIQDLPVRKVSGIGNVTEKMLGALG
ITSCIHLGQEMALLALLFSETSWHHFLDISLGLGSTHIERFWPGRQRGDGERKSMSTERT
FGEMVAFEEQFSLCRQLCQDVAQDLQKEALKGKTVTLKLKNVNFEVKTRAWTLPCAVATS
DELFAVAKDLLKTEIDNVSPQPLRLRLMGIRVSSFVSADEKKPQQKSIVGFLQKGRADSS
SPSQISSHKPVKEHQPKPPGQTQPLPCPSLVQQSQGQEDHPWVPSWGGVEVGKTGEQQQS
FFQKARAQRLRLQAEREDPPEDGKWNVLETRLGPASSATKPKQTPTPIQKNPNTSAETQF
SMSALTASDNMTHAPTASSTEAHVSTSLCWSTEPGTDSLTCPVCFREVNTTDLTVFNRHV
DQCLSGVPMEHNIHTDRELEKGSSVCEEEVEKEREGDIEKEIAEGERRREEGLMVIGRDP
LSRCMLDSSAGDNKGLLLYETSTTNISLNAVGLNPVFLNTCPNGGVSIPRVTDPNILKGS
SQSDPRVRPLSPGGPRPMTTPKVESHDPREPALTCPVCQVTQDTDNLTLFNRHVDLCLNQ
EVLHELEGLASVDCTPHNATPAAHKEREQPLRRAPQKGKSKRRGSSPPPPSKKVKALGPA
RNTIDKFFR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggagactggggggacgtcctccagtggggagggcttcctctccagaatggccctcaat
gacaacaaggctggaatggagggccttgacagggacaagataaacaagatcatcatgaag
tcctccaagggctccaggttctatgagaacgagatgaaaaaggaacagcaggtgaaccag
cgcattgagaggatgatgctgcagaaagcacacatcactgagcaacagttgagcaaagca
caaacacaggtggaaaagatgacctttgacctggagagggttcgtgacttgagccgtgtt
attgtgcacgtggatatggatgccttctacgctgcggtggagacgagagactgtcctgac
ctgaaggacaaacccatggccgtgggctctatgagcatgctgacaacttccaactaccat
gcaaggaagtttggggtccgtgccgccatgcctggcttcatcgcgaagaagctctgccca
aacctggttattgttccaaccgactttgacaaatacagagcagtgagcgctgaagtccaa
gagatctttgcagactatgaccctcacttccttcccatgagtctggacgaggcctacctg
gacatcagtgagcacctggagcagaggagggtctggccagaggccctgcgtacccaccgt
ctccggaccaacgacactgggacagctacatccgtgtcagtgccagttgaggagcagggt
gatggcctacaggagacagtagagggtctgtctcctgtcctgtttgaggacagccccagc
tcctcctgcccctttctgcaggatgctcctgggggagacgtgatggtgtttgggacctgt
gccgaggaggcggtgagagagatgcgtttccgcatcgagcagaaaacctcacttactgcc
agcgcaggcattgccccaaacatgatgctggccaaggtgtgtagtgataagaacaaaccc
aacggccagtacagactcccatctaaccgacaggctgtcatggtattcatacaggacctg
ccagtccggaaggtatcaggcattgggaacgtgacagagaagatgctgggagctctaggt
atcaccagctgtatccatcttggccaggagatggcgctgctggccttgctgttctctgag
acatcctggcaccactttctcgacatctccctgggcttgggctccacacacatcgagagg
ttctggccgggcaggcagaggggggacggggagagaaaaagcatgagcacagagaggaca
tttggagagatggttgcattcgaggagcagttctctctgtgcaggcagctgtgtcaagac
gtggctcaggacctgcagaaggaggctctcaagggcaagacagtgacgttgaagcttaaa
aatgtcaactttgaggtgaaaaccagagcgtggacattgccgtgtgccgttgctacgagt
gacgagctctttgctgtcgctaaagacttgctgaagactgagattgacaacgtcagcccc
cagccactgagactgaggctcatgggcattcgagtttccagctttgtcagcgctgacgag
aagaaaccccagcagaagagcattgtgggattcctccagaaaggcagggctgactccagt
agcccctcacagatctcctcccacaagcctgtgaaagagcatcaacctaagcctccaggc
cagacccagcccctcccctgcccttccctggtacagcagagccaggggcaggaggatcac
ccctgggtacccagctggggaggagtggaggtggggaagactggggagcagcagcagtcc
ttcttccaaaaagctcgcgcccagaggctgcggctgcaagctgagagagaggacccacca
gaggatggaaagtggaacgtcttggagaccagactgggcccagcctcatcagccaccaag
cccaaacagacaccgacacccattcagaagaatccaaatacatcagcagagacacaattc
tctatgagtgcattgacagcttctgacaacatgacacatgcacctacagccagcagcaca
gaggcccatgtgtctacttcattgtgctggtccacagagccagggacagacagtctgacc
tgccctgtgtgcttcagggaggtgaacaccacagacctgacagtcttcaacagacatgtc
gaccagtgtctcagtggggttcctatggagcacaacattcacacagacagagaactagag
aaaggctccagtgtctgtgaggaggaggtggagaaagagagggaaggggatattgagaaa
gagatagctgaaggggaaaggaggagggaggagggattgatggtgataggtagggaccca
cttagtaggtgtatgttggactctagtgcaggtgataataaaggactacttctgtatgag
actagtacaactaatatttcactaaacgctgtgggcctgaaccctgtcttccttaacact
tgtccaaacggaggtgtgtctatacctagagttacagaccctaacatcctgaagggttca
tctcaaagtgaccctcgtgttcgtccgttgtccccaggtggccctcggccaatgactacg
cccaaggttgagtcacatgaccccagagaacccgccctcacctgcccagtgtgtcaggtg
acacaggacaccgataacctcaccctctttaaccgacacgttgacctctgtctaaaccag
gaggtcttacatgagcttgaaggactggcgtctgtggactgcaccccccacaatgcaaca
cctgctgcccacaaagagcgagagcagcccctgcggagagcgccacagaaaggcaagagc
aaaaggagaggctcctctcccccgcccccatctaagaaggtcaaagccctgggcccagct
cggaacaccatcgacaagttctttaggtga
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