Oncorhynchus nerka (sockeye salmon): 115140949
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Entry
115140949 CDS
T07952
Name
(RefSeq) nectin-2-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03266
Virion - Herpesvirus
one04514
Cell adhesion molecules
one04520
Adherens junction
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115140949
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115140949
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115140949
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115140949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115140949
04090 CD molecules [BR:
one04090
]
115140949
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Nectin family
115140949
CD molecules [BR:
one04090
]
Proteins
115140949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
ig
V-set
Ig_3
I-set
Ig_2
TM_ErbB1
DUF4342
DUF6338
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
115140949
NCBI-ProteinID:
XP_029535331
LinkDB
All DBs
Position
LG14:7410100..7485477
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AA seq
535 aa
AA seq
DB search
MAREDARNRHDFTKIIGLFSVVTLLTFQGALSQQVKVEPEVMSYPSQAVNLRCAFADAGG
IQLTQVSWIYEPKEGERLNIAVYHPKFGASFPTSPLKGRVRFTTEPPSLSNPSIQISDVK
MSDEGKYICEYATYPSGNEQGVTSLVMLAKPRNSASGVTVIASTVAAGAKPVVVARCESA
DGRPAARIAWVTAVNGNATSASTAGADNTVTVSSQYMLVPTAADNGKDISCLVSHRTQAK
PESFLMKLAIEYPPQVTIVGYDNNWYMGRTNVALTCQATANPIPTTITWKTMSGQMPDTV
QVKENVLTVLKVDEQANTTFVCEVKNRLGTGKDQVTVMVREPSVVPSNAGVVAGAVIGSL
LALLLVAALIAVLVTRSRRQQQGYRGNPNHSSYDIKSRVFGGGKKGSKNGTGAGAGGNGA
GGNNSPIYVYKEGSAHDGLTEKANHHVPLHLGRHGEGGVATAQDILLSGELDEAERRKFD
QLEDDEESYDHFGRGGPILQLRPTHDQDGIMGGYLDDDMESQRDGSVISRTAVYV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaggacgctcggaataggcatgacttcacaaaaatcatcggactgttcagc
gtggtcacgttgctgacttttcaaggggcattgtctcagcaggtgaaggtggaaccggaa
gtgatgtcctaccccagccaggcggtcaacctgaggtgtgccttcgcagacgctggaggg
atacagctcacacaggtgtcctggatctatgagccgaaggagggcgagaggctcaacatc
gccgtgtaccaccctaaatttggggcaagtttccccacatcgcccctgaaggggcgggtc
cgcttcacgacggagcccccctccctcagcaacccctccatccagatctcagacgtcaag
atgagtgacgagggaaaatacatctgtgaatacgccacctaccccagcggcaacgaacag
ggtgtcacctccctcgtcatgctagccaaacccaggaactctgcctccggggtaacagtg
atagcctccactgtcgccgcgggagccaagccagttgttgtggcccgctgtgagtcggcc
gacggtcgccctgctgcccggatcgcatgggtgacagctgtcaacggcaacgctacctcc
gcctctacggcgggcgctgacaacaccgtgacggtatccagccagtacatgctggttccc
acagcagcagacaacggcaaagacatcagctgtttggtgtcccatcgaacccaggccaag
cctgagagcttcctgatgaaactggccatcgaataccccccacaggtgaccatcgtgggc
tatgataataactggtacatgggtcggaccaacgtggctctgacctgtcaggctactgcc
aaccccattcctaccaccatcacatggaaaactatgtccggtcagatgccagacacagtg
caggtaaaagaaaacgtgctgaccgtgctgaaggtggatgagcaggccaacacaaccttc
gtctgcgaggtcaagaaccgcttgggcaccggcaaagaccaggtcactgttatggtccga
gaaccctctgtggtcccctccaacgcaggcgtggtggcaggtgctgtgattggctccctt
ctggcccttctccttgttgccgcccttattgccgtcctggtcacccgaagccgccggcaa
cagcagggttaccgcggcaacccaaaccacagctcctacgacataaagtcgcgcgtcttc
ggtggcggcaagaaggggagcaagaacgggacgggtgctggcgccgggggcaacggggcg
ggcggcaacaacagccccatctacgtctacaaggagggctccgcccatgatggcctgact
gaaaaggccaatcaccacgtgccgctacacctggggaggcatggtgaggggggggttgcc
acggcgcaggacatcctgctgagcggcgagctggacgaggcagagcggagaaagtttgac
caactggaggatgacgaggagagttacgaccactttggaaggggcgggcccatcctgcag
ctccgcccaacacatgaccaggacggaatcatgggtggttaccttgacgacgacatggag
tctcagcgcgacgggtcggtcatctcacggactgccgtgtacgtgtag
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