Oncorhynchus nerka (sockeye salmon): 115141296
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Entry
115141296 CDS
T07952
Symbol
lca5l
Name
(RefSeq) lebercilin-like protein
KO
K24828
lebercilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115141296 (lca5l)
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115141296 (lca5l)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115141296 (lca5l)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
Others
115141296 (lca5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lebercilin
TSC22
DUF745
TACC_C
Motif
Other DBs
NCBI-GeneID:
115141296
NCBI-ProteinID:
XP_029535898
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Position
LG14:42873236..42880627
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AA seq
555 aa
AA seq
DB search
MSLSLRHHTRGIVQQGDANYEVGAGDVDSSCSSGQSTPSRSSRGYSSTTGSRVDSQGSCT
QSDYEEEADTTANRTFALSPNKKPGLGTKTAKTRTQNKGGQWCKKKKNTNLRNRKASLVP
PIKPLEGPDQRIRSAHRHRIKELNSQVWELQQQLSGVATENKLLKQLQVRHTVALQRFQD
SQSGLPQVLAKHGNEVRGLQELLRKSRIRRNSLSRRLRGTEEELLRIKDVLHRLQLLSED
RSLKEREELSHRLALISVDLNRKNKRIQAEYLFTFTGARETKSVQTDDLSSLPIEAPCQL
ELEYACSLQHLELEKQKSLSWESFAIDFTDRSDAADTLVDDKGSNNNEDFAEDGELDGDS
DKENPQLQGEEDCLAEKTASSPKASGEQTEPFESQVRYTLEDFLNTERANKALESSPRTK
RLYKFKETIQNLHSGKPAYTSHTHSLRKSPPRYIKSQTRVENLGSGAYEPSFVTLPAEKW
QRRDTRGPQPEDGVVRSKKSSLMKELFGQAPITDPIAMQTGRSRVQSTDLDRMSSHHTGD
ASPVSPGRETKIIFD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagtctgagacaccacaccagaggcatagtgcagcagggcgatgctaactat
gaagttggagcaggggatgtagactcaagctgctcctcaggccagtccaccccctccagg
tcaagcaggggatacagcagtacgacaggcagcagggtagactctcaggggtcatgcacc
cagtcagactacgaggaggaggctgacactactgcaaataggacctttgccctctcgcca
aacaagaagccaggtctaggcacgaagacagctaaaacacgaacgcaaaacaagggaggg
cagtggtgcaaaaagaagaaaaacactaatttaaggaaccgcaaggcctctctcgtccct
ccaatcaagcccctggagggcccagaccagcgcattaggtctgcccacaggcaccgcatc
aaggagctcaacagccaagtgtgggagctacagcagcagctgagtggtgtcgccacagag
aacaaactgctaaagcagctccaggtccgccacacagtggcgctacagcgcttccaagac
tcacagagtggccttccccaggtcctggccaagcacggcaatgaggtgcgtggtctgcag
gagctcctgcgcaaatcccgcatccgccgcaacagtctgtccaggcgtctgcgtggaacg
gaggaggagctgctgcgtatcaaggacgttctgcacaggctgcagctgctcagcgaggac
cgcagcctgaaagagagggaagagcttagccacaggctggccctgatcagtgtggacctg
aacaggaagaacaagaggatacaggctgaatatcttttcacatttacaggggcaagagaa
actaaatctgttcaaacagatgacttgtcctctctccccattgaggctccgtgccaactt
gaactagaatatgcctgttcactccagcatctggagttggagaagcagaagagcttgagc
tgggagtcctttgccatcgacttcacagacagaagtgacgcagcagacacgttggtggat
gacaaaggatcaaacaataatgaagactttgcggaggatggagagttggatggtgattct
gacaaggagaatcctcagcttcagggtgaggaggattgccttgcagagaagacagcgagt
tccccgaaggcttcaggagagcaaacagaaccgtttgaaagccaggtccggtacactctg
gaggattttctgaatacagaacgtgccaacaaggcccttgaatcctctcccaggaccaaa
cgcctctacaaattcaaagaaaccatccagaacctacacagtggaaagcctgcctatacc
agccatacccacagcctgagaaagagccctcctagatacatcaagagccagaccagggtg
gagaaccttgggtctggggcatatgagccctcctttgtcactctaccagcagagaagtgg
caaaggcgtgacaccaggggccctcaaccggaggatggtgtagtccgcagcaagaagagc
agcttgatgaaagagcttttcggccaggccccaatcactgatccaattgccatgcagaca
ggcagatccagagttcaaagtacagacctggacagaatgtcatctcaccatacaggagat
gctagcccagtctcacctgggagagagaccaagatcatttttgattga
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