Oncorhynchus nerka (sockeye salmon): 115142639
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Entry
115142639 CDS
T07952
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115142639 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115142639 (psen2)
Peptidases and inhibitors [BR:
one01002
]
Aspartic peptidases
Family A22: presenilin family
115142639 (psen2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Oxidored_q3
TT_ORF2a
Motif
Other DBs
NCBI-GeneID:
115142639
NCBI-ProteinID:
XP_029538102
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Position
LG15:complement(9466941..9483642)
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AA seq
450 aa
AA seq
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MSTSDSEEDSYNERTALVASEIPSVPSYQQDPDQPQPADMEPRRRTVAPEPAAEPPSLDR
SAVEREPVDLEEEEELPLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEKNGQQLIYT
PFTEDTDTVGERLLNSVLNTIIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMMLFW
FSFMYLGEVFKTYNLAMDYPTVAMIIWNFGVVGMICIHWKGPLQLQQAYLIAISALMALV
FIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMANPARNAEPTNQDTGSSDEEAHRSEGSALARDWVEPETQVSSGMNRSYSTEDDLDEED
RGVKLGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPI
SITFGLVFYFSTDNLVRPFMDNLAAHQFYI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctcagacagtgaagaggactcctacaatgagaggacagctctggttgcatcc
gagataccttctgtgccatcttaccaacaagaccctgaccaaccccagcctgcagacatg
gagcccaggcgccgcacagtggccccagagcctgcagctgaaccccctagcctggacagg
agtgccgtggagcgggagcctgtagacctggaggaagaggaggagctcccccttaagtac
ggcgccaagcatgtcatcatgctgttcgtccccgtcaccctttgcatggtggtcgtcgta
gccaccatcaagtcggtcagcttctacactgagaagaacggacagcagctgatctatacg
ccgttcacagaggacacagacacagtgggcgagcggctgctcaactcagtgctcaacacc
atcatcatgatcagcgtcatcgtggtcatgaccatcttcttggttgtgctctacaagtac
cgctgctacaagttcattcacggatggctcatcctgtcatcgctgatgatgctcttctgg
ttcagcttcatgtacctgggggaggtatttaaaacctacaacttggccatggattaccca
acagtagccatgatcatctggaactttggggtggtaggaatgatctgtatacactggaag
gggcctctgcagctgcagcaggcctacctcatcgccatctcggccctcatggccctggtg
ttcatcaagtacctgcccgagtggtccgcctgggtcatcctgggagccatctccgtctac
gatttggttgcggtcttgtgccctaaaggacctctcaggatgcttgtagagaccgcacag
gagcgtaatgagcccatcttccctgctctcatatattcatctgccatgatatggatggtt
gggatggccaacccagcaagaaatgcagagcccacaaatcaagatacaggttcctcagat
gaagaggcacatcggagtgagggcagcgccctggcgagggactgggtggagccagagact
caagtgtcttcagggatgaacaggtcctactcaaccgaggacgacctagacgaggaagac
cgaggagtcaagctgggactgggggacttcatcttctacagtgtgctggtggggaaggct
gccgccaccggaggagactggaacaccacgctggcctgcttcgtggccattctcatagga
ctctgcctcactcttctgctgctggccatattcaagaaggccctcccagctctccctatc
tccatcaccttcggcctggtcttctacttctctacagacaacctggtccgcccctttatg
gacaacctcgctgcccaccagttctacatctga
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