Oncorhynchus nerka (sockeye salmon): 115142839
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Entry
115142839 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
one04144
Endocytosis
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115142839
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115142839
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115142839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115142839
04121 Ubiquitin system [BR:
one04121
]
115142839
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115142839
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115142839
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115142839
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
115142839
NCBI-ProteinID:
XP_029538482
LinkDB
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Position
LG15:19338586..19400331
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AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQSLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVHTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNRDSVNSDNIPPRSSRDTSPSSDSTDDWV
IVPNGHTVNSMGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
SYGSSLASASGASSDPAQENGAAPTQAASAPPAIGAPAGAPPSGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPDSLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaacttcaagttactgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacggccagtcgaagaagaccgag
aaatgcaacaacacacacaaccccaaatggaagcagtcactgacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaagccgacatcttattg
ggaatggctacattggagatcagtgaaaccctaaagtccaatgatatgaaactctctgag
gtggtgcacaccctgcagctatgttcagaccgagaccacactgacgtggtgggggacctg
tcagtctgtctggacggcatgcaggtggacccagagacattcacctctgcagagagggac
catgttgctgttccaaacggggaggtgagacagaacagagatagtgtcaacagtgataac
ataccacccagatccagcagggacacgtccccctccagtgactccacagacgactgggtc
atcgtccccaacggccacacggtcaacagcatgggttctcctgccccatccccagggggc
tccaagtccacacgtccccccagacctgcacggcctcccccacccaccccccgcagacca
gccgcatccccagcctcctccagcagctctacccatagcgaggtgagtgagcccccggct
tcatatggctcgtccctggcctcagccagcggggcctcctcagaccccgctcaggagaac
ggagcagcacccacacaggcagccagcgcccccccagccatcggggcaccagccggtgca
cccccatctggtgggcccccccgagtcatccctaacggcccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagaggacgaca
tgggaccgaccagactctctcccctctgggtgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacgtggcagcgccccacacaggagtct
gtgcgcaactatgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatttttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacacggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcaccacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcacagtggatggcatc
ccctactttgtggaccacaatcggagaaccaccacctacatagaccctcgcacgggcaaa
tcctcccttgagaacgggccccagatcacctacgtcagggacttcaaagcgaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcaccgtcacc
cgcaaaactctgtttgaggattcattccagcaaatgatgagctttcatccacaagatctc
aggcggagactgtggatcattttccctggagaggaaggcttggactacggaggagtggca
agggagtggttcttcttgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctatatcaaccctgac
cacctcaagtacttcaagttcattggacgattcattgccatggccttgttccatgggaag
ttcatcgacacaggattctccctgcccttctacaagcgcatcctgaacaaacccctggcc
ctgaaggacctggaatctatcgacccggaattctacaactccctcatctggatcaaggat
aacaacttggaggagtgtggtctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaatgtcttggtcactgaggaaaac
aaagaggaatacatcaggctggtggcagagtggaggttgtccagaggggtggaggagcag
acccaggccttcttcgagggcttcaatgaggtccttccccagcagtacctgcagtacttt
gacgccaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggcacaccatctacaggcactacgcacgcagcagcaagcagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcaccggc
acctgtcgactccccatgggtggcttcgctgaccttatggggagtaatggcccacagaag
ttctgcattgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
cgactggacctgcccccgtacaagagctacgagcagctgaaggaaaaactgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
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