Oncorhynchus nerka (sockeye salmon): 115143172
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Entry
115143172 CDS
T07952
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one00604
Glycosphingolipid biosynthesis - ganglio series
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115143172
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
115143172
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115143172
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
115143172
Glycosyltransferases [BR:
one01003
]
Glycan extension
Glycolipid
115143172
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
115143172
NCBI-ProteinID:
XP_029539163
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All DBs
Position
LG15:complement(36530068..36565474)
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AA seq
532 aa
AA seq
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MRSLRKTVLLAIVASVVLVVALLHSWPTRAYTTVDVRQRPGPIVERHLEERLPEPDQRSA
NIPYRLKESVAGLLARNGCMCEGESGGVNLPFAQLLFPRVSAHPLHTAFDASELEEMKRR
RAKEYQGFQMRSQTPVDMLIVAEANNPLQYPTQGVEVRPLKTILIPGLALQDLPRELYTV
NFTSTLGVFNVAAEVEGVKVKGDGEMHMTLMSSLLPNLNRQLQFVSYTNTLFHPSTADTV
QFETEGHQAMFIIKIRHRVTPKLYNTGPKGEYNISALVTIATKTFLRYDKLQDLIDSVRR
YYPTVTIVIADDSENPKTVSGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYLLWVDDDFIF
TANTKLEKLVDVLEKTTLDLVGGAVREATGYTATYRQTISIEQGEEEEGDCLHMRRAFHH
IIQGFPNCVVTDGVINFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGSLHVGSCDDVIV
NHATKIKLPWVSQSESDKTYAKFRYPPASSDATHTKNGLLYFKNHFQCLTHN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccctgaggaagacagtgttgttggccattgtggcatcagtggtgttggtggtt
gccctcctccattcttggcccaccagggcctacaccacagtggatgtccgccagagacca
gggcctatagtagagaggcacctggaggagaggctcccagaaccggaccaaagatctgcc
aacatcccctatcgcctgaaggagagtgttgcaggtctgttggcacgtaacgggtgcatg
tgtgagggtgagagtggtggcgtgaacctgccctttgcccagctgctgttcccacgggtg
tcggcccaccccctgcacactgcttttgatgcctctgagctggaggagatgaaaagacgg
agggccaaggagtaccagggcttccagatgaggtctcagactcctgtagatatgctcatt
gtggccgaggccaacaatcctctgcagtacccaacacagggggtggaagtacggcccctc
aaaaccatactcatcccagggcttgccttacaagaccttcccagagagctgtacacagtc
aacttcacctccaccctgggagtgtttaatgtggcagcggaggttgagggggtaaaggtc
aagggtgacggggagatgcacatgaccctgatgagcagcctgctgcccaacctgaaccgg
cagttacagtttgtctcctacaccaacacattattccaccctagtacagcagacacagtc
cagtttgagaccgagggacaccaagccatgttcatcatcaagatccgtcatcgtgtaact
ccaaaactctacaacacaggacccaaaggggaatacaacatcagtgcccttgtaacgata
gcaaccaaaactttcctgcgctatgacaagctccaagatctcatcgacagcgtgcgacga
tactatcccactgttaccatagtaatagctgatgacagcgaaaaccccaagactgtctct
ggcccctacatcgaacattacatcatgccatttggaaagggatggtttgcaggacggaac
ctagctgtttcccaggtgaccactaaatatctgttgtgggtggatgatgacttcatcttc
actgccaacaccaagctggagaaactagtggacgtactggagaagaccaccctggatctg
gtggggggtgcagtgcgggaggccacaggctacactgccacctacaggcagaccatctcc
attgagcaaggggaggaggaggagggtgactgcctgcacatgcggagggccttccaccac
atcatacagggcttcccaaactgtgtggtcactgacggggtcatcaacttcttcctggcc
cgcacagacaaggtccagcaggtgggcttcgacccccgcctggccagagtggcccacctg
gagtttttcattgatggccttggctcgcttcacgtgggatcctgtgatgatgtcatcgtc
aatcacgccaccaagatcaagcttccctgggtcagccaatcagagagtgacaagacttac
gccaagttccgctacccaccagcctcctcggacgccacacacaccaaaaatggcctcctc
tattttaagaaccacttccagtgtttgactcacaattaa
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