Oncorhynchus nerka (sockeye salmon): 115144060
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Entry
115144060 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
one04144
Endocytosis
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115144060
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115144060
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115144060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144060
04121 Ubiquitin system [BR:
one04121
]
115144060
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115144060
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115144060
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115144060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
115144060
NCBI-ProteinID:
XP_029540571
LinkDB
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Position
LG2:58520866..58557944
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AA seq
857 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDDQSKKTEKCSNTHTPKWKQSLTVIVTP
FSKLIFRVWSHQTLKADFLLGVATLDMSETLKSNDMKLSEVVQILQLCSDQDNTDVVGDL
SICLDGVQVDPETFASAERDHAATAPNRDVRQNEDGGNRSSRDTSPSSDSTEDWVIIPNG
HEINCTGSPAPSPRGSKSTRPPRPARPPPPTPRRPVASPASSSSSTPSDVSEPPASDGSS
SDPPPENGAEPPQAASSSGPEAIGAPPAGGLPQLSPVSNGPLPPGWEQRVDQNGRMYYVD
HIEKRTSWNRPDSLPSGWERRVDPMGRVYFVDHISRTTTWQRPTQESVRNFEEWQHQRSQ
LQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGRVYFVHHTSRMTQW
EDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSSLENGPQITYVR
DFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQIMSFHPQDLRRRLWIIFPGEEG
LDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFKFIGRFIA
MSLFHGKFIDTGFSLPFYKRILNKPLALKDLESIDTEFYNSLIWIKDNNLEECGLEMFFS
VDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEVLP
QQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYAHSSKQILWFWQFVKEMDNEKRMR
LLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPTYKSYEQL
KEKLMFAIEETEGFGQE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacaacttcaagtcactgttctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacgaccagtcgaagaagacggag
aaatgcagcaacacccacacccccaaatggaagcagtcactcacagtaattgtcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggccgacttcctattg
ggcgtggccacattggacatgagtgaaaccctcaagtccaatgatatgaaactctctgag
gtggtgcagatcttacagctgtgttcagaccaggacaacacagacgtggtgggagacctg
tccatctgtctggatggtgtgcaggtggacccagagacctttgcctctgcagagagagac
catgcagctactgctccaaacagggacgtgaggcagaacgaagatggaggcaacaggtcc
agcagagacacgtcaccttccagtgactctacagaggactgggtgatcatccccaatggc
cacgagatcaactgcacggggtctcccgccccatccccaaggggctccaagtccacacgc
ccccccagacctgctcgtcctcctccacccacccctcgcagaccagtcgcttccccagcg
tcctctagcagctccactcccagcgacgtgagcgagcccccggcttcagacggctcctcc
tcggacccccctccggagaacggcgcagaacccccacaggcagccagcagcagcggaccg
gaagccattggggcacccccagccggagggctaccccaactcagccctgtcagcaacggc
ccactgccaccgggctgggagcagagggtggaccagaatgggcgcatgtattacgtggat
cacattgaaaagaggacgtcatggaaccgacccgattctctcccctctgggtgggagcgg
cgagtggacccaatgggcagggtgtacttcgtggaccacatcagccggaccaccacgtgg
cagcgccctacgcaggagtcggtgcgtaactttgaggagtggcagcaccagcgcagccag
ctgcagggggccatgcagcagttcaaccagaggttcatattcggactccaggatcagcaa
atagccgcagcaaacaaagagtttgacccgcttgggccgctgccacatggctgggagaag
cgaacagacaccaacggcagggtatattttgttcaccacacatcgcggatgacccagtgg
gaggacccacggacgcaagggctgcttaatgacaagcctctacctgaaggctgggagatg
aggttcactgtggacggcatcccctactttgtggaccacaacaggagaaccaccacctac
atcgaccctcgcacaggcaaatcctcccttgagaacgggcctcagatcacctacgtcagg
gactttaaagccaaagtgcagtacttcaggttctggtgtcagcaactgtcaatgccacag
cacatcaagatcaccgtcacccgcaaaaccctctttgaggattcattccagcaaataatg
agctttcatccacaagatctcagacggaggctgtggataatattccccggagaggaaggc
ttggactacggaggagtggcaagggagtggttcttcctgctgtctcatgaggtgctgaac
cccatgtactgcctgtttgagtacgctgggaaggataactactgtctccagatcaaccct
gcctcttacatcaaccccgaccacctcaagtacttcaagttcatcggacgcttcatcgcc
atgtccttgttccacgggaagttcatcgatacaggattctccctgcccttctacaagcgc
atcctgaacaagcccctggccctaaaggacctggaatccattgacacggaattctacaac
tccctcatctggatcaaggataacaacctggaggagtgtggtctggagatgttcttctct
gtggacaaggagatcctgggggaggttactactcacgagctgaagccggacggaggcaac
gtactggtcactgaggagaacaaagaggaatacatcaggctggtggcagagtggagattg
tccagaggtgtggaggagcagacccaggccttcttcgagggcttcaacgaggtcctcccc
cagcagtacctgcagtactttgatgctaaggaactggaggtgatgctgtgtggcatgcag
gagatagacctggtggactggcagaggcacaccatctacagacactatgctcacagcagc
aagcagatcctctggttctggcagtttgtgaaggagatggacaacgagaaacgcatgagg
ctgctacagtttgtcactggcacctgtcggctccccatgggtggcttcgctgacctcatg
gggagtaatggaccacagaagttctgcatcgagaaggtgggcaaagaaaactggcttcca
agaagtcacacttgctttaatcgactggacctgcccacctacaagagctacgagcaactg
aaggagaagctgatgtttgccatcgaggaaactgagggcttcggacaggagtag
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