Oncorhynchus nerka (sockeye salmon): 115144263
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Entry
115144263 CDS
T07952
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00514
Other types of O-glycan biosynthesis
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115144263 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115144263 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115144263 (rfng)
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115144263 (rfng)
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115144263 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
115144263
NCBI-ProteinID:
XP_029541020
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All DBs
Position
LG16:complement(20410721..20424822)
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AA seq
419 aa
AA seq
DB search
MHVSSMGVSKFCFLFSLALCALLLLLIPALQPSQHQGDLPQPRAHTKPARAGTGASKIPQ
HPGGLVVPLQADVGKVTVGNYGIDGGSIGQGTPRETKRTGDGDWVYTAGRGDTQGNGKHT
DSQTGPKEDFPHRAGVVVGAGGSRSRTPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKA
KEQTFIFTDGEDQELRRRAGANVVNTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMD
DDNYVIVPSLLKLLSSFQHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFC
ISRGLALKMSPWASLGNFISTAEKIRLPDDCTIGYIIEALLEVTLTHTHLFHSHLENLQR
LPTDTVLEQVTLSYGGFENRRNVVSIGGAFSLVEDPSRFKTVHCLLYPETDWCPSKGHH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagttctgctttctgttctccctggccctctgt
gccctcctgctgctcctcatccctgccctccagccctcacagcatcagggggacctgcct
cagccccgggcccacaccaagcctgcccgggcgggcacaggtgccagcaaaatcccccag
caccctggaggtctggttgtccctctccaggcagatgtggggaaagtgacagtgggaaat
tatgggattgatggtggatctatagggcagggcacacccagagagaccaagaggactggg
gatggggactgggtgtatacagctggtcgaggtgacacccagggcaatgggaagcataca
gactctcagacagggccgaaggaggacttcccccacagagctggagttgtggtgggggct
ggagggtctcggtccaggacccctctagagctgaaagacattttcatagcggtgaagacc
accaggaagtaccacaagtccagactggatttactgttccagacctgggtgtccaaagcc
aaagaacagacctttatattcactgatggggaggatcaggagctgaggaggagagcaggg
gctaatgtcgtcaacaccaactgttcagcagcacacacgcggcaggccctgtgctgtaag
atgtctgtggaatacgacaagttcatcgagtcgcagaggaaatggttctgccatatggat
gatgataactatgtgattgtacccagtctgctgaagctgctgtcctccttccaacacacc
caggatgtttacctgggccgtcccagcctcgaccaccccatagaggctgccgagagggtc
aagagtgatggatctgtgtcagtgaagttctggttcgctacaggaggtgcagggttctgt
atcagtcgtggtctggccctcaagatgagtccatgggctagtctggggaacttcatcagc
acggcagagaagatccgtctccctgacgactgcactatcggttacatcatcgaggcgctg
ctggaggtgacgctgacacacacccacctcttccactcccacctggagaacctgcagagg
ctgcccacagacaccgtgctggaacaggtcactctgagctatgggggttttgagaacagg
aggaatgtggtcagcattggaggagccttctccctggtggaggacccctcacggtttaag
actgtccactgcctcctctacccagagactgactggtgtcctagtaagggtcaccattga
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integrated database retrieval system
