Oncorhynchus nerka (sockeye salmon): 115144886
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Entry
115144886 CDS
T07952
Name
(RefSeq) transcription factor E2-alpha-like isoform X1
KO
K09063
transcription factor E2-alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115144886
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
115144886
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
115144886
NCBI-ProteinID:
XP_029541851
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All DBs
Position
LG17:complement(9492723..9520089)
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AA seq
682 aa
AA seq
DB search
MNEQPQQRMAAVGTQDKELNDLLDFSAMFAPPVANGKNRPTTLASSQFGGSALDERSSSG
SWGPGEQNSPSFNQGRGYGDGSHYNEHEGLSSPFLSSGIGGKNERVPYSSFGGQPGFLPS
DIAMPSPDSMSPSGLKSASQFYPGSYPNNPRRRPPDGQLDTQPKKIRKPPGLPSSVYASS
SGDEYARDNGGYPGTKPGSVYPGSFYMQEGLHPSSDPWASSGPLGQSGYSAMLGNSPHIG
QPGSFSAINPQDRMVRTTPHYKRQPLPLSPQNYPLHGSEVNGSLAPGFHSGSGSYNHTSS
INGADSIMANRGTTAGSSGDEIGKALASIYPSDHNSNNFSSTPSTPVGSPQGIAGAASQW
PRPSGQSALSPNYEGQLHALQNKMEDRLEEAIHVLRSHAVQGPPGLGGGAHSDMHSLLSA
VSSVHNGGLGGLSQAFSNAGLALSNRHPTMGGNHQEEPTGLPPSSTLLHGHHASGPPQST
GQPEGFTSLPGSVARSTHSSSGSDIKREDKEDDENSSIADKSEDEKKETKRIRARKEALT
LQILSGLSGLSDPGDDQEDEDDEDLPPEVKVEREKERRVANNARERLRVRDINEAFKELG
RMCQLHLSNDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGES
PMQLSGGHPGMGGDGHNPVSHM
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagccgcagcagagaatggctgcagtgggaacacaagacaaggaactcaac
gacctcctggatttcagtgcgatgtttgcaccacctgtggctaatgggaagaacagaccg
acgacactcgctagcagtcagtttggtggatcagctctggacgagcgcagtagctctgga
tcctggggccctggagaacagaacagcccctccttcaaccaaggacggggctacggagat
ggctcccactacaatgagcatgagggcctgtcatctcccttcctcagttcaggaatcgga
ggtaaaaatgagagggtaccatactcttcgtttggaggccagcctggcttcctacccagt
gacatcgccatgcccagtccagattccatgtccccctctgggctaaagtctgcctctcag
ttctaccccggatcgtaccccaacaaccccaggaggaggcctcccgatggccagctagac
acccaaccgaagaagatccggaaaccccctggcctgccttcctcggtgtatgcctcttcc
tccggggatgagtatgcccgtgacaacggaggatatcctggcaccaaacctggctctgtc
tacccaggctctttttacatgcaagagggactccacccctcctctgacccttgggcctcc
tcaggacctttgggtcagtctggctactctgccatgctggggaactctccccacatcggc
cagcccggatccttctctgccatcaacccacaggacaggatggtgaggacaaccccacac
tataagcgtcaacccctgcctctgtccccacagaactaccctctccacggcagtgaggtg
aacggcagtctcgcgcccggcttccactctgggtctgggagctacaaccacacatcctcc
atcaacggcgcagacagcatcatggccaatagaggcaccactgcagggagctcaggggat
gagattgggaaggctcttgcttcaatctacccctcggaccacaacagtaacaacttctcc
tccacaccctccaccccagtgggctcaccccagggaattgcaggagctgcatctcaatgg
ccaagaccttcagggcagtctgccctgtcacccaactatgaagggcaactgcatgccctg
cagaacaaaatggaggaccgcctggaggaggccatccacgtgctgcgtagccacgctgtc
caaggccctcccggcctgggaggaggagcccactctgacatgcacagcctgctgagcgct
gtgtcgtctgtacacaacggtggcctgggaggtctctctcaggccttctccaatgctggc
cttgccctcagcaacagacaccctaccatgggagggaaccaccaggaggagcccacaggc
cttcctcccagcagtaccctgctgcacggtcaccacgcctccggacccccacagtccact
ggacaaccagagggcttcaccagtctgccaggaagtgtggcccgctccacacactcgtcc
agcgggtcggacatcaagcgggaggacaaggaggacgacgagaactcctccatcgctgac
aagtctgaggacgagaagaaagaaaccaaacgcatcagagcaagaaaggaggcgttgacc
ctccagatcctctctggcctctcaggcctgtcagacccgggagatgatcaagaggatgag
gatgacgaggaccttcctcctgaggtaaaggtagagcgtgagaaagagcggcgagtggcc
aacaacgcccgcgagcggctgcgagtgcgagacatcaacgaggctttcaaggagctgggc
cgcatgtgccagctgcacctcagcaacgacaaacctcagaccaaactgctcatcctgcat
caagccgtcaacgtcattctcaacctggagcagcaagtcagagaacgcaacctgaaccct
aaagcagcttgtctgaagcgacgggaggaggagaaagtctctggggtggtgggggagtcc
cccatgcagctctcaggaggccaccccggcatggggggagatggccataacccagtcagc
catatgtaa
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