Oncorhynchus nerka (sockeye salmon): 115145606
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Entry
115145606 CDS
T07952
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115145606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115145606
04121 Ubiquitin system [BR:
one04121
]
115145606
Membrane trafficking [BR:
one04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
115145606
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115145606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
WDR55
Beta-prop_SCAP
DSE1_N
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF4
ASA1
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_NOL10_N
F-box
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_SPT8
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_RIG_1st
TRM82_WD
Ge1_WD40
CDtoxinA
WD40_RFWD3
Beta-prop_IFT140_2nd
KNTC1_N
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
PALB2_WD40
Beta-prop_WDR19_2nd
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
115145606
NCBI-ProteinID:
XP_029542961
LinkDB
All DBs
Position
LG18:1643420..1791496
Genome browser
AA seq
762 aa
AA seq
DB search
MNQDLLSGGSRRGLGGRRGGPGAQRGNASSSARTPQGQQPGEEADEEEHMNRVVEDQEHQ
QSRVQPAASAGGEGVEEPWTSRQNGPQGDGEEEDGGGVPNEVNGGVTKGGRWMWEAERRQ
QGGDDEEEEEEEENNNSGSQQGEEEERTEGGARTGRDEEDEEEMDQDSDDFEHSEESGRE
EEEEEEDGLHSPSLRSDVSVPNNNLDQSSGCQHQSSPIKKKMKRKLDHGPEVRSFPSGKK
PCKGSEYPSATGLVPYPATPTTFGHIRTANGQGQQRRRITSIPSPTGLQEWLRTFQSWSG
PEKLMALDELIDSCEPTHVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQ
TCRYWRILAEDNLLWREKCREEAGIDEPLAFKKRKVTKPGFTHSPWKCAYIRQHRIDTNW
RRGDLRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTGGVW
SSQMRDNIIISGSTDRTLKVWNAETGDCIHTLYGHTSTVRCMHLHEKTVVSGSRDATLRV
WNVETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY
SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKI
WDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES
GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggatctgctgtcggggggcagcaggcggggcctggggggccggcgagggggc
ccgggggcccagcgaggtaacgcctcctcctcggcccggacgccccagggccagcagcct
ggagaggaggccgacgaggaggagcacatgaaccgggtggtggaggaccaagaacaccag
cagtccagagtccagcctgcggcctcggcagggggggaaggagtggaagagccgtggacc
tccaggcagaatggaccccagggagacggggaggaggaggatggaggaggagtacccaac
gaggtgaacggaggagtgactaagggcggcaggtggatgtgggaggcggagcgacggcaa
caggggggggatgacgaggaggaggaggaggaagaggagaacaacaacagtggcagccag
cagggagaggaggaggaaaggacagagggaggagcgagaacggggagggatgaggaggac
gaggaggagatggaccaggacagtgatgactttgagcattcggaggagagcgggagggag
gaggaagaggaggaggaggatggcctccactcaccctccctcaggagtgatgtgtctgtc
cccaacaacaacctggaccagtcctcggggtgccaacaccaaagctcacccatcaagaag
aagatgaagagaaagttggaccatggcccagaggtccgatctttcccttcaggaaaaaag
ccctgcaaaggctccgagtatccaagtgctacagggctggtcccctacccagccaccccc
accacgtttgggcacatcaggacagctaacggtcaggggcagcagaggcggcgtatcacc
tccatcccttctcccacaggtctccaggaatggctccggacatttcagagctggagtggc
ccagagaagctcatggcgctggatgagttgatcgacagctgtgagcccacgcatgtcaaa
cacatgatgcaggtcattgagccgcagttccaacgcgacttcatctccctgctgcccaaa
gagttggccctgtacgtgctgtcgttccttgagcccaaggacctgctgcaggccgctcag
acctgtcgttactggaggatcctggctgaggacaacctcctctggagggagaagtgccgg
gaggaggcaggcattgatgagcctctagccttcaagaagaggaaagtcaccaagccgggc
ttcacccacagcccctggaagtgtgcatacatcaggcagcataggatagacaccaactgg
aggagaggagacctccgatcacccaaggtgcttaagggtcatgatgaccatgttatcacc
tgcctccagttctgtggtaaccgcatcgtcagcggctctgacgacaactcgctcaaggtc
tggtcggctgtcacgggaaagtgtctgaggacgttggtgggccacacagggggcgtgtgg
tcgtcccagatgagggacaacatcatcatcagcggctccaccgaccggacgctgaaggtc
tggaacgcggagacgggcgactgtatccataccctgtacgggcatacctcaacggtgcgc
tgtatgcacctgcacgagaaaacggtggtgagtggttctcgcgacgccacgctgcgcgtg
tggaacgtggagacgggccagtgtttacacgtcctcatgggccacgtggcggcggtgcgc
tgcgtccagtacgacggccgcagggtggtcagcggggcctacgacttcatggtcaaggtc
tgggaccccgagactgagacctgcctccacacgctgcaaggccacaccaacagagtctac
tcactacagtttgatgggatccacgtggtgagcggtagcctggacacgtctatccgggtg
tgggatgtggagactggtaactgcatccacactctgacaggtcaccagtccctcaccagc
ggcatggagctcaaagacaacatcctggtctcgggcaacgccgactccaccgtcaagatc
tgggacatcaagacgggacagtgcctgcagacgttgcaaggtccccacaagcaccagagc
gccgtgacgtgcctgcagttcaacaagaactttgtcatcaccagctcggatgacggcacg
gtgaagctgtgggacctgaagacgggcgagttcatccgtaacctggtgacgctggagagc
ggcggcagcggcggggtggtgtggcgtatccgcgcctccaacaccaagctggtgtgtgcc
gtgggaagccgcaacggcaccgaggagacaaaactactggtgctagactttgacgtggac
atgaagtga
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integrated database retrieval system
