Oncorhynchus nerka (sockeye salmon): 115146124
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Entry
115146124 CDS
T07952
Name
(RefSeq) guanine nucleotide exchange C9orf72-like isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115146124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146124
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
115146124
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Ureide_permease
Motif
Other DBs
NCBI-GeneID:
115146124
NCBI-ProteinID:
XP_029543799
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Position
LG18:27236223..27243019
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AA seq
527 aa
AA seq
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MSSGPPQSPTVAKTEVTVKGECPIFAATFAYWDNILGPRVCHIWAPRCEQPLLLSDGEVT
FLANHTLNGEILRSTECGAVDVKFFVLAEKGVIIISLIFDGELKGDKNTCALSIILPQTE
LAFYLPLHTVCVDRLKHIIRKGRIWMQKGYNIISVLSSEIVPIMELLSSMKTHSVPEDID
IKDTILNDDDIGDSYHEDFLHKAVSSHLQTCGCSMVVGSNPDKVNKVVLTLCLFLTPAER
KCSRFCKADSTFKYDTGLFVQGLLKDSMGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPP
CHEHTHIQRRYMRSELSALWKAASEEDIAPDTDTGIHTEESFTPDLYALFSPVLFFQLDW
NWPCLFCCITHCLIYLKCITFELVLFTFTLMKEIWMLFCFLTTKSSSFLRNVFQDVMHKD
TLVKSFIDEVFMLKPGLNLRSTYLAQFLLILHRKALTLLKYIEDETQKGKKPFRSLRSLK
TDLGLMVEGDLNIIMALAEKQKAGLHSFVFGKQFYTSVQERDVLMSF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggcccacctcagtcacccacagtggctaagacagaggtgactgttaaagga
gaatgccctatcttcgctgccacctttgcctactgggacaacatcctgggcccgcgggtg
tgtcacatctgggctcccaggtgcgagcaaccactgttgctgagcgatggcgaagtcacc
ttcctggccaatcacacgctgaacggggagattctgcgcagcacagagtgcggcgccgtg
gacgtcaaattcttcgtcctagctgaaaagggtgtcatcatcatctcgctcatcttcgac
ggcgagctgaagggtgacaagaacacctgtgccctgtccatcatcctgccgcaaacagag
ctggccttctacctgcccttgcacactgtctgtgtggatcggctcaaacacataatccgc
aagggacgcatctggatgcagaagggctacaacataatttctgtgctgtcatcagagatt
gtccccatcatggagctgctgtcatccatgaagacacacagtgtcccagaggacatagac
atcaaggacaccatcctaaatgacgatgacatcggagacagctatcatgaagatttcctg
cacaaggcagtcagttctcatctccaaacttgtggctgctccatggtggtcggaagcaac
ccagacaaagtcaacaaggtagtgctcacgctgtgcctcttcctcacccctgctgagagg
aagtgctctcggttctgtaaagctgactctactttcaagtatgacacaggactgtttgta
caaggcctcctcaaggactccatgggcagttttgtcttgcccttccgccaggtgctgtac
tcaccctacccgaccacgcacatcgacgtggacatcaacacggtgaagcagatgccaccc
tgccacgagcacacacacattcagcggcgctacatgcgctcagagctcagcgcgctctgg
aaggcggccagcgaagaggacatcgcccccgacactgacaccggcatccacaccgaagag
tccttcacccccgacctgtatgctctcttctctcctgttctgttcttccaattagattgg
aattggccatgtttattttgctgcataactcattgcttgatttatttgaaatgtatcaca
tttgaattagtcttgtttacatttacattaatgaaagaaatatggatgttattctgtttt
ttgaccactaaaagctcctcttttctcagaaatgtttttcaggatgttatgcataaagac
accctggtaaagtcatttatagatgaggtgttcatgctgaagccaggtctcaatctgcga
agtacttacttggcccagttcttgctgatccttcacaggaaggcgctcacactactcaaa
tacattgaagatgagacgcaaaagggaaagaagcctttccgatccttgcgcagcttgaaa
accgacctcggcctgatggtggaaggcgacctgaatatcatcatggcgttggctgaaaag
caaaaggctggactgcactcctttgtatttgggaagcaattctacaccagtgtacaggag
cgagatgtgctcatgagcttttga
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