Oncorhynchus nerka (sockeye salmon): 115146415
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Entry
115146415 CDS
T07952
Symbol
bbs5
Name
(RefSeq) Bardet-Biedl syndrome 5 protein isoform X1
KO
K16748
Bardet-Biedl syndrome 5 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115146415 (bbs5)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
BBSome
115146415 (bbs5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBL5
bPH_3
Vps36_ESCRT-II
GRAM
Voldacs
PH_TFIIH
POB3_N
Motif
Other DBs
NCBI-GeneID:
115146415
NCBI-ProteinID:
XP_029544364
LinkDB
All DBs
Position
LG1:13831609..13843348
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AA seq
342 aa
AA seq
DB search
MASMLDVLWEDRDVRFDITAQQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRIIW
HSLALPRVNLSVGYNSIINITTRTANSKLRGQTEALYILTKSNNTRFEFIFTNVVPGSPR
LFTSVIAVHRAYETSKMYRDLKLRGALIQNKQLRLLPREEVYDKINGVWNLSSDQGNLGT
FFITNVRIVWHANMNESFNVSIPYLQIRSIRIRDSKFGLALVIESSQQTGGYVLGFKIDP
MDKLQDAVKEINSLHKVYSANPIFGVDYEMEEKPQPLEELTVDQPPDDVEIEPDEQTDAF
TAYFADGNKQQDREPMFSEELGIAVEKLKEGFTLQGLWEVMG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatgttggatgttctctgggaggatagagatgttagattcgatataaccgca
cagcaaatgaaaacgcgacctggcgaggtcttgatagactgccttgattctattgaagac
accaaaggaaacaatggggatcgagggaggctcctggtaacaaatctgaggatcatctgg
cattctttggctctgccaagagtcaatttgtctgttggatacaattccattattaacatc
acaacaaggacagctaactctaaattgagaggccagactgaagcactgtatatcttgaca
aagtctaacaatacaagattcgagttcattttcaccaatgtggttccagggagtccgaga
ctatttacatctgtcattgctgttcacagggcttatgagacctctaaaatgtaccgtgac
ctgaagctgagaggagctcttattcaaaataaacaattgaggcttttgcctcgagaggaa
gtgtatgacaaaatcaacggggtgtggaatttatccagtgaccagggtaatctagggacc
tttttcatcaccaatgttcggatcgtgtggcatgccaatatgaacgagagcttcaacgtc
agcattccctatcttcaaattcgttccatcagaataagagactcaaagtttggcctagct
ttggtgatagaaagctctcaacagactggaggatatgtgcttggatttaagatcgaccca
atggataagcttcaagatgcagttaaagagatcaactcgctgcacaaagtctactctgcc
aaccccatctttggagtggactatgagatggaggaaaagcctcagccactggaggagctg
acagtggaccagccccccgatgatgtggaaattgagcccgatgagcagactgatgctttc
actgcttactttgctgatggcaataagcaacaagaccgggaacctatgttttctgaggag
ctgggaattgcagttgaaaaattgaaggaggggttcacacttcaaggactctgggaagtc
atgggctga
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integrated database retrieval system
