Oreochromis niloticus (Nile tilapia): 100533982 Help Entry 100533982         CDS       T06104                                  Name (RefSeq) thrombospondin-1b precursor   KO K16857   thrombospondin 1 Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl04115   p53 signaling pathway onl04145   Phagosome onl04148   Efferocytosis onl04350   TGF-beta signaling pathway onl04510   Focal adhesion onl04512   ECM-receptor interaction onl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:onl00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     100533982   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100533982  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100533982    04148 Efferocytosis     100533982   09143 Cell growth and death    04115 p53 signaling pathway     100533982   09144 Cellular community - eukaryotes    04510 Focal adhesion     100533982   09142 Cell motility    04820 Cytoskeleton in muscle cells     100533982  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:onl04131]     100533982   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:onl00536]     100533982 Membrane trafficking [BR:onl04131]  Endocytosis   Phagocytosis    Opsonins     100533982 Glycosaminoglycan binding proteins [BR:onl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100533982 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 EGF_CA cEGF TSP1_ADAMTS EGF Motif Other DBs NCBI-GeneID:  100533982 NCBI-ProteinID:  NP_001266666 Ensembl:  ENSONIG00000012080 UniProt:  C5HIF2 LinkDB All DBs Position LG19:9527703..9536279 Genome browser AA seq 1172 aa AA seqDB search MMLCGIFLLLMLWSCEGARLAESRDDNSVYDLFELARVNKRHHGVSMVKGQDPYSPAYKV LNANLIPPVPDSSFRDLLDSIQTERGFLLLVNLKQFKKTRGSLLTVEKTDGSGPIFEIIS NGKANTLDLVYSTVDQQQVVSIDEVDLATGQWKNITLFVQDDRAQLFVGCEEISDSELEV PIQKVFSQEVADTARLRIGKGALKDKFFGVLQNVRFVFGTTLDAILRNKGCQTGAALTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIANMFNELKGLNTVVRQLSKELQR VAEESSSIINYMNLRKGVCIHNGIMRQDRDEWTVDSCTECTCQNSATVCRKITCPLIPCA NATVPDGECCPRRGTPSDYAEDGWSAWSEWTQCSVTCGRGIQQRGRSCDRINSKCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVACGEGVMTQIRLCNSPTPQMGGKDCEGEG RHTKVCRKSPCPINGGWGPWSPWDTCSVTCGGGVQTRKRLCSDPAPKYGGKDCIGDASES QICNKQECPIDGCLSSPCFPGTKCTSFRDGSFKCGRCPSGYTGNGITCKDIDECKEVPDA CHTHNGVHRCENTEPGYNCLPCPPRFSGPQPFGRGVAEATAKKQVCVPRNPCKDGSHNCH KNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC PYLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDSCDNCV HVANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIHDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSNTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatctttttgctcttgatgctttggagttgtgagggcgcacggctg gcagagagccgggatgataacagtgtgtatgacttatttgaattggcccgggtaaataag agacaccatggcgtgagtatggtcaaaggacaagacccatacagccctgcgtacaaggtc ctgaacgcgaacctgatcccccccgtccccgacagctccttcagggacctcctcgactcc atccaaacagagcggggcttccttctcctggtcaacctgaagcagttcaaaaaaaccaga ggcagccttttaactgttgaaaaaaccgacggatccgggcccatcttcgagattatttcc aacgggaaggcgaacacgctggatttggtgtactccacggttgaccagcagcaggtcgtg tctatcgatgaggtcgatttggccaccgggcaatggaagaacatcaccctgttcgttcag gatgaccgggcgcaacttttcgtcggctgtgaagagatcagcgattcagagttggaagtg ccaatccagaaagttttctcccaggaggtggcagacacagccagactcaggatcggaaag ggagctctaaaggacaaatttttcggagtactccagaatgtgcgctttgtctttggtaca actctggatgccatactgagaaataaaggatgccaaactggagctgctctaactgatgtc atgaccttggataatccagtcaatggctcaagccctgccattaggaccgattacactggt cacaaagccaaagatctgcagtccgtctgcggcttctcctgtgaagacattgccaacatg tttaatgagctcaagggactcaatacggttgttagacagctgtcaaaggagctccaaaga gtggctgaggaaagcagttccataataaattatatgaatttgcgcaaaggagtttgcatc cacaacggcatcatgcgccaggacagagatgaatggaccgtcgatagctgcaccgagtgc acttgccagaactctgctaccgtgtgtcgcaaaatcacctgccctctgatcccatgcgct aatgccaccgtgcccgacggagagtgctgccctcgccgtggaacaccaagcgactacgca gaagacggctggtccgcctggtctgagtggacccagtgttctgtgacttgcggccgtggc atccagcagcgcggccgctcctgcgaccgcatcaacagcaagtgtgagggcacctctgtg cagacccgtgactgctacccacaagaatgtgacaaacgcttcaagcaggatggaggctgg agccactggtcaccctggtcttcctgctctgtggcctgcggtgaaggggtcatgactcaa attcgcctctgcaactcccccacaccccagatgggcggcaaggactgcgagggagaggga cgtcacaccaaagtctgcaggaagtcgccctgtcctatcaatggaggctggggaccttgg tcaccttgggacacctgctctgttacctgcggtggaggggttcagacccgtaaacgtctc tgctccgaccctgcccccaaatatggcggaaaggactgtatcggcgatgcttctgaatct caaatttgcaacaaacaggagtgtcctattgatggctgtctctccagcccctgcttccca ggcacaaagtgcaccagcttccgagacggctcattcaagtgtggcaggtgtccatccggc tacacagggaacggcatcacgtgcaaagacatcgacgaatgcaaagaggtccccgatgct tgccatactcataacggagtccaccgttgtgaaaacacggagccgggttacaactgtctt ccctgtcccccgcgtttctctggtcctcagccgtttggaagaggtgtggcagaggcaact gctaaaaaacaggtttgcgttcctcgcaacccttgcaaggacggaagccacaactgccat aaaaatgcaaactgcatctacttgggtgtcttctccgagtctatgttccgctgtgagtgc aagccaggatatgccgggaatggacgcatttgcggagaggacagtgacctggatggatgg cccaacactgacctgctgtgtgtggaaaatgccacttatcactgcaagaaggataactgt ccctaccttcccaactccggccaggaagatcatgacaaagatggcctgggtgatgaatgt gaccacgatgatgacaatgatgggatccccgatgatagggacaactgtccaagagtgtac aaccccgcccagtatgatgcagacagggatgatgttggtgatagctgtgacaactgtgta catgtagccaacactgaccaaacagacactgataacaacggagagggtgatgcctgtgct gttgacattgatggtgatggcatcctgaatgagaatgacaactgcccgtatgtctacaac gtggaccagagagataccgacagggacggcgttggagatcactgcgataactgccctctg gagcacaatcccgatcagatcgactctgactcggatcgcgtgggagacaagtgcgacaac aaccaggacattgacgaggacggtcaccagaacaacttggataactgcccctacattccg aatgcgaaccaggcagaccacgacaaggatggcaagggtgacgcctgcgaccatgatgat gacaatgatggcattccagatgacaaagacaactgcagactggcctttaaccctgatcag gtggactctgatggtgatggacgtggtgatgtgtgcaaagatgattttgaccaagataat gttttggacatccatgatgtatgcccggaaaactttgccatcagtgaaaccgacttccgc agattccagatggttcctctggaccccaagggtacctcccagatcgaccccaactgggtt gtccggcatcagggcaaggagctggtccagactgtcaactgcgaccctggcattgctgtc ggttatgatgagttcagcgcggtggacttcagtggaacgttcttcatcaacacggacaga gacgatgactacgctggtttcgtgtttggctaccagtccagctcgcgcttctacacagtg atgtggaaacagatcacccagacgtactggtccaacacacccacgagagctcagggctac tccggcttgtcaatcaaagtggtcaactccaccacagggcccggtgagcacctgaggaat gccctgtggcacaccggagacaccccaggacaggtgcgcactctgtggcacgaccccaag aatattggctggaaagacttcactgcctacagatggcatctgacccacagacccaagact ggacttatcagagtggtcatgtatgaaggcaagagaatcatggctgactccggaaacatc tacgacaaaacctacgccggtgggcgactaggcttgtatgtcttctctcaggagatggtt tacttctcggacctcaaatacgaatgcagagatacataa

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