Oreochromis niloticus (Nile tilapia): 100534416
Help
Entry
100534416 CDS
T06104
Symbol
tshr
Name
(RefSeq) thyrotropin receptor precursor
KO
K04249
thyrotropin receptor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04080
Neuroactive ligand-receptor interaction
onl04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100534416 (tshr)
04081 Hormone signaling
100534416 (tshr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
onl04030
]
100534416 (tshr)
G protein-coupled receptors [BR:
onl04030
]
Rhodopsin family
Peptide
Thyrotropin
100534416 (tshr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
Comm
Motif
Other DBs
NCBI-GeneID:
100534416
NCBI-ProteinID:
NP_001266550
Ensembl:
ENSONIG00000001143
UniProt:
Q98TF4
LinkDB
All DBs
Position
LG15:complement(2255896..2283461)
Genome browser
AA seq
778 aa
AA seq
DB search
MQVITCALFTLVTLPISTASEADSCPAVCECSEWKTLTISCFDIDILPRFPPSTETLWLF
ETRLSSVPADAFASVVNISRIYISVDTTLQRLEKHSFYSLRKITHIEIRNAKSLTYIDPE
AFKHLPELKYLGIFNTGLTFFPDLSNIHSNDMNFILEIVDHPYITEIPANSFRGITSEAL
TVMLYGNGFRSVRHHAFNGTKLDQVDLHRNKYLTEMDDGCFVGTISGPILLDVSQTGITS
LPSTGMDSVRELKARDAWALKKLPPIKTFKHLTVANLTYPSHCCGFKNLKKKRGFLEYII
CNLTALYDQHQKRSVGPLRMPSLQGDGVVETLPDRELKDGGHRESQQDWKSGDFHGSLHY
HAYFGGHPDEDVGFGETLKNPQEDNSQEFDSRYDYVVCEEGEEVACAPAPDEFNPCEDIM
GFGFLRVSVWFVSLLAVLGNVVVLLVLLTSHYKLSVSRFLMCHLAFADLCMGIYLLLIAS
VDLHTRAEYFNHAIDWQTGPGCGLAGFFTVFASELSVYTLTAITLERWYAITFAMRLDRK
LHLHHAAAVMLGGWVFCILLALLPLVGVSSYQKVSICLPMDTESTAAQIYIMSVLVLNIL
AFFIICACYFKIYCTVHNPHYHSGSKDTNIAKRMAVLIFTDFLCMAPISFYAISAVLDRP
LITVSNSKILLVLFYPLNSCANPFLYAIFTKAFRGDIFILLSKVGLCQQRAQLFRGQTVS
SKGSSGTSQIRRDKDKSRKGGSIGQEEVPIHLKRSAGHTYHPAIGQQKNPEESQRLDT
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgataacgtgcgcattgtttacgctcgtcaccctccctatcagcactgcatct
gaggctgactcctgccctgccgtctgcgagtgctccgagtggaagactctcactatctcc
tgctttgacattgatattctccctaggttcccaccgagcacggagacgctgtggcttttt
gagacccgtctatcatctgtgccagcggatgcctttgccagcgtggtcaacatctcaaga
atatatatatctgtggacacgacgctgcagaggctggagaagcactcgttttacagcctg
aggaaaattacccacattgagattcggaacgcaaaaagtctgacctacattgacccagaa
gcctttaaacatctcccagagctcaagtacctggggattttcaatactggcctcactttc
ttccctgatttgagcaacatccactctaacgacatgaacttcatcctggaaattgttgat
cacccctacatcaccgagatcccagccaactcgttccgtggcatcaccagcgaagcgctg
acagtcatgctgtatggaaacggcttcagatccgtacgacatcatgccttcaacgggaca
aagttagatcaagtcgaccttcacaggaataagtatttaaccgagatggatgacggatgt
tttgtgggaaccatcagcggccccattcttctagacgtgtcccaaacagggatcacctcc
ctgccaagcacagggatggactctgtccgggagctgaaggcacgtgatgcctgggccctc
aagaaactgccgcccatcaagacctttaagcacctcaccgtcgccaacctgacgtacccg
agccactgctgcggcttcaaaaaccttaaaaagaagcgaggctttttggagtacatcatc
tgcaaccttactgctttgtacgaccagcatcaaaagcgctccgtggggcccctgcgcatg
ccttccctccagggggacggtgttgtggaaacactcccggaccgggagctaaaagacggg
ggtcacagagagtcccagcaagattggaagagcggtgacttccacggcagcctgcactac
cacgcctactttggaggccacccagatgaggatgtgggtttcggagagaccctaaagaac
ccccaggaggacaacagtcaggagtttgacagtcgttatgactatgtggtgtgcgaggag
ggagaggaggtggcgtgcgcaccagcgcccgatgagttcaatccttgtgaggacataatg
ggttttggcttcctgcgggtgtctgtgtggtttgtgagcttgctggctgttctgggaaac
gtggtggtgctcctggtgctcctcaccagccactacaagctctcagtctcccggttcctc
atgtgccacctggcctttgcagatctgtgcatggggatttacctgctgctcatcgcctct
gtagacctccatacgcgagccgaatacttcaaccacgccatagactggcagacgggcccc
ggctgtggacttgctgggtttttcacagtcttcgccagcgagctgtctgtctacaccttg
acggcgatcactctggagaggtggtacgccatcacctttgccatgcggctggatcgcaag
ctgcacctgcatcacgcagcggctgtcatgttaggcggctgggtcttctgcatcctcctg
gccttgctcccactggtcggtgtgagcagttaccagaaggtcagcatctgcctccccatg
gacaccgagtccacagcggctcagatctacatcatgtcggtgctcgtcctcaacatctta
gcatttttcatcatctgtgcttgctacttcaagatctactgcacggtgcataaccctcac
taccactctggatccaaggataccaacattgccaagcgcatggctgtcctcatcttcact
gacttcttgtgcatggcgccaatttccttctacgccatatcagccgtgctggaccggccg
ctcatcaccgtgtccaactccaagattttattggtgctcttctacccgctcaattcctgt
gccaacccgttcctctatgccatcttcactaaagccttcaggggagacatattcatcctt
ctcagtaaggtgggtctgtgtcagcagcgagcacagctgttcagaggccagacagtctcg
tcaaagggcagcagcgggacatctcagataaggagagacaaggataaaagccgcaaagga
gggagcataggccaggaagaagtgcctatccacctgaaaaggtctgcaggacatacctac
cacccagcaatcggccaacagaagaatcccgaagagagccagaggttggacacatga
DBGET
integrated database retrieval system