KEGG   Oreochromis niloticus (Nile tilapia): 100628564
Entry
100628564         CDS       T06104                                 
Name
(RefSeq) MHC class II beta chain
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100628564
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100628564
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100628564
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100628564
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100628564
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100628564
  Exosomal proteins of epithelial cells
   100628564
  Exosomal proteins of breast milk
   100628564
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Psg1 C2-set_3
Other DBs
NCBI-GeneID: 100628564
NCBI-ProteinID: XP_005455916
Ensembl: ENSONIG00000007425
UniProt: A0A669E1H8
LinkDB
Position
LG3:36164751..36169387
AA seq 251 aa
MASSFLYTFLFISIHTADGFLEYIVDRCEFNSTELKDMEYIYSHYYNKIEYIRFSSSVEQ
YVGFTEYGVMLAEILNNNTALLNSSRQMITEYCYHNIDVHDQAIIAKSVRPRVRIKSKTP
LSGQHPAMLVCSVYDFFPNKIKVRWLRDEQEVTSDVTSTEVMPNGDWYYQTHSYLEYTPR
SGEKISCVVEHVSLSEPLITDWESSSDKSTSESTPLTAIGASILTLGLVLLLAGFIFYRW
KARDPTPSSNE
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcttcatcttttctctacaccttcctattcatcagcatccacacagcagatggattt
ttagagtatatagtggatcgttgtgaatttaactccactgagctgaaggacatggagtac
atctactctcactattacaacaagatagagtacatcaggttcagcagcagtgtggagcag
tatgttggattcactgagtatggagtgatgctggcagagatcttgaacaataatactgca
ctgctgaattcatcgagacaaatgataacggaatactgttaccacaacattgatgttcat
gatcaggctattatagctaaatcagttcggcccagggtcagaattaagtccaagaccccg
ctttctggtcagcatcctgccatgttggtctgcagtgtctacgacttctttcccaataag
atcaaagtgaggtggctcagagatgaacaggaagtcacctctgatgtcacttccactgaa
gtgatgccaaatggtgattggtactaccagacccactcctacctggagtacacacccagg
tctggggagaagatctcctgtgtggtggagcacgtcagcctgagtgaacctctgatcact
gactgggagtcatcctcggacaaatcaacatctgaatcaacgccactgactgccatcgga
gcctctatactgaccctgggtctggtcttacttctggctggatttattttctacaggtgg
aaagcccgagatcctacaccatcttccaatgaatga

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