Oreochromis niloticus (Nile tilapia): 100628564
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Entry
100628564 CDS
T06104
Name
(RefSeq) MHC class II beta chain
KO
K06752
MHC class II antigen
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04145
Phagosome
onl04514
Cell adhesion molecules
onl04672
Intestinal immune network for IgA production
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100628564
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100628564
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100628564
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100628564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100628564
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100628564
Exosomal proteins of epithelial cells
100628564
Exosomal proteins of breast milk
100628564
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Psg1
C2-set_3
Motif
Other DBs
NCBI-GeneID:
100628564
NCBI-ProteinID:
XP_005455916
Ensembl:
ENSONIG00000007425
UniProt:
A0A669E1H8
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Position
LG3:36164751..36169387
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AA seq
251 aa
AA seq
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MASSFLYTFLFISIHTADGFLEYIVDRCEFNSTELKDMEYIYSHYYNKIEYIRFSSSVEQ
YVGFTEYGVMLAEILNNNTALLNSSRQMITEYCYHNIDVHDQAIIAKSVRPRVRIKSKTP
LSGQHPAMLVCSVYDFFPNKIKVRWLRDEQEVTSDVTSTEVMPNGDWYYQTHSYLEYTPR
SGEKISCVVEHVSLSEPLITDWESSSDKSTSESTPLTAIGASILTLGLVLLLAGFIFYRW
KARDPTPSSNE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttttctctacaccttcctattcatcagcatccacacagcagatggattt
ttagagtatatagtggatcgttgtgaatttaactccactgagctgaaggacatggagtac
atctactctcactattacaacaagatagagtacatcaggttcagcagcagtgtggagcag
tatgttggattcactgagtatggagtgatgctggcagagatcttgaacaataatactgca
ctgctgaattcatcgagacaaatgataacggaatactgttaccacaacattgatgttcat
gatcaggctattatagctaaatcagttcggcccagggtcagaattaagtccaagaccccg
ctttctggtcagcatcctgccatgttggtctgcagtgtctacgacttctttcccaataag
atcaaagtgaggtggctcagagatgaacaggaagtcacctctgatgtcacttccactgaa
gtgatgccaaatggtgattggtactaccagacccactcctacctggagtacacacccagg
tctggggagaagatctcctgtgtggtggagcacgtcagcctgagtgaacctctgatcact
gactgggagtcatcctcggacaaatcaacatctgaatcaacgccactgactgccatcgga
gcctctatactgaccctgggtctggtcttacttctggctggatttattttctacaggtgg
aaagcccgagatcctacaccatcttccaatgaatga
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integrated database retrieval system