Oreochromis niloticus (Nile tilapia): 100690564
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Entry
100690564 CDS
T06104
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100690564
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
100690564
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Arm_2
Atx10homo_assoc
HEAT
Cnd1
ZER1-like_2nd
ARMC9_ARM
UTP20_C
Motif
Other DBs
NCBI-GeneID:
100690564
NCBI-ProteinID:
XP_003448317
Ensembl:
ENSONIG00000012321
UniProt:
A0A669BI94
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Position
LG20:18507996..18521159
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AA seq
610 aa
AA seq
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MSAGTMKETSRTLSTRNSGGRYMSTSGVWEEQINASTWPKSPNGIKPSKSDPALAPPFSP
ATGPSMRIKGQMAQGQSTFQTRTNRHSVSSGTNGNAITSSQSRIVRMPSTQSQNEGKMGT
MKMENKSMMNIPDLTLKEAVEFLSSSEESYQQWGATFIQHTTYTDESAKSEVFQLGGIPT
LVTLLRSGNPQVCQVAAGALRNLAFKNQNNKLEVQRCGGIAKALQLLKETDSTETQKQIT
GLLWNLSSANELKQELTATALPALTQHVVVPYTSLSDTGPSSYIDPSVFNCATGCLRNLS
SGKDGQRQTMRSCPGLIDSLMSYMKSCVAEENPDDSSLENCACILHNLSYKLEQESSGSF
SNYNPSRDAQPEKSPTIGCFSPKSSKAQKTFSFDTVDASPPSGVKWLSHPNAIDTYLSLL
ESSENKATLEACCGALQNLTATKGNASDAVSQILVSKSRDLSQFGPLLKPSNPKLQNTAL
SLLGNMSRTSSVQGTMAKQILPQLGELLEGGPSKFGNSDESIAAACNTVVRLMSANSDTS
KKVITNAVIQSLTDLSENKKFTKGSNAASLLLYSIWQDKNLQSAMKKIGLTKSAFINNNI
TQVVSRLEGL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctggcaccatgaaagagacgagtcgtactctatccactagaaattctggagga
agatatatgagtacctccggtgtttgggaagagcaaatcaatgcctccacctggccaaag
agtcccaatgggataaaacccagtaagagtgaccctgccttggctccacctttttctcct
gccactggacctagcatgagaataaaaggacagatggcacagggccaaagcacctttcaa
actcgaacaaacagacacagtgtttcgtcagggactaacggtaatgcgataaccagcagc
cagtcacgcatagtccggatgccctccacccagtctcaaaatgagggcaagatgggtacc
atgaaaatggagaataaatcaatgatgaacattccagacctgaccctgaaggaggctgta
gagtttttgagtagcagtgaggaaagttaccagcagtggggagcaactttcatccaacac
accacctacaccgacgagtctgccaaatcagaggttttccaactcgggggtattcctact
ctggtgaccctgctgagaagcggtaatcctcaggtgtgtcaggttgctgctggagctctg
aggaacctggcgttcaagaaccaaaataacaaactggaagttcagcgctgtggtggtata
gctaaggcccttcagctgctaaaggaaacagattctactgagacccagaaacaaattacc
ggcctgctgtggaacctgtcctctgccaacgagctgaagcaagagcttacagctacagca
ctgcccgccctaactcaacatgtggtggtgccttacacaagcttgtcagacaccggtccg
agcagctacattgacccctctgtcttcaactgtgccacagggtgcctgcggaacttgagc
tctggtaaggatggacagaggcagacaatgagaagctgtcctggcctcatcgactccctc
atgagttacatgaagtcctgtgtggcagaggaaaaccctgatgactcgtccttggagaac
tgtgcatgcatcctccataacttgtcatacaaactggagcaagagtcctctgggagtttc
agcaactacaacccaagtagagatgcccaacctgagaaaagccccacaattggatgcttc
agccctaagagcagcaaggcgcaaaagacgttctcctttgatactgtagatgctagcccc
ccatcaggtgttaagtggttgtcccatcctaacgctatagacacctacctgtccctcctg
gaatcgtccgagaacaaagccactctagaggcctgctgtggtgctctgcagaacctcact
gccaccaagggaaacgcgtcagatgctgtgagccaaattttggttagtaagtccagagat
ctgagtcaatttggacctctgctgaagccatctaacccgaagcttcagaacactgccttg
tccttgttgggtaacatgtctcggaccagcagtgtgcaaggcaccatggcaaagcagatt
ttgcctcagctcggagaactcctggagggtggaccctctaagttcggaaattctgacgag
tctatagcagcagcttgcaacacagttgtaagactgatgtcggcaaacagtgacaccagc
aagaaggtcatcactaatgctgtcattcagtcactaactgacctcagtgaaaacaagaag
tttaccaagggcagtaacgcagcctcgctgctgctgtacagcatatggcaagacaagaat
ttgcaaagcgctatgaaaaagatagggttgaccaaatcagccttcatcaacaacaacata
acccaagtggtctcgcggctcgaaggactgtga
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