Oreochromis niloticus (Nile tilapia): 100691267
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Entry
100691267 CDS
T06104
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100691267 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100691267 (bdnf)
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Growth factors (RTK binding)
100691267 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
100691267
NCBI-ProteinID:
XP_005466979
Ensembl:
ENSONIG00000020614
LinkDB
All DBs
Position
LG1:complement(17993837..18008587)
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AA seq
306 aa
AA seq
DB search
MSDEADVDKACVRKDCVAFLCSGYAGTVRGFHQVRRVMTILFLTMVISYFSCMRAAPLRD
APGMRGHRTEGYLGAAATAERGHGTPQSGGGPGQRGELPSLTDTFEQVIEELLEVEGEAA
QLGQGADKSQGGGGPSSVVTTEAKDVDLYNSRVMISNQVPLEPPLLFLLEEYKNYLDAAN
MSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAIDMSGQQVTVMEKVPVPNGQLKQYF
YETKCNPMGYTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSKKKIGWRFIRIDTSCVCTL
TIKRGR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaggctgatgttgacaaagcctgtgtgagaaaggattgtgtggcatttctc
tgctcaggatatgccggtacagtgagagggttccaccaggttagaagagtgatgaccatc
ctgttccttactatggttatttcatacttcagttgcatgagagctgcgcccctgagagat
gccccgggcatgcggggccatcggacggaaggctacttgggcgctgctgcaacggccgaa
agaggccacgggactccccagagcggtggagggccaggccagcgcggggaactgccctcg
ctcacagacacatttgagcaagtgatagaggagttgctggaggtggagggcgaggcggcg
cagctgggacagggggccgataagagccagggaggtggtggcccatcctctgtagtcacc
acggaggccaaggatgtcgatctgtacaactcgcgggtgatgatcagcaaccaagtgcct
ttggagccgccgttgctctttctcctggaggaatacaaaaactatctggatgccgctaat
atgtccatgagggtgcggcgacactccgatccctcacgacgtggagagctcagtgtgtgt
gacagtattagccagtgggtgacagctgtggataaaaagacggcaatagacatgtccggg
cagcaagttaccgtcatggaaaaggtccctgtccccaatggccaactgaagcaatacttt
tatgagaccaaatgcaaccccatggggtacacaaaggagggctgcagaggaatagacaag
cggcattataattcccaatgcaggacaacccagtcctacgtgcgagcgcttaccatggat
agcaaaaagaagattggctggcggtttataaggatagacacttcatgtgtatgcacattg
accattaaaagagggagatag
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integrated database retrieval system
