KEGG   Oreochromis niloticus (Nile tilapia): 100691565
Entry
100691565         CDS       T06104                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X3
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100691565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:onl03000]
    100691565
   04121 Ubiquitin system [BR:onl04121]
    100691565
   03036 Chromosome and associated proteins [BR:onl03036]
    100691565
Enzymes [BR:onl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     100691565
Transcription factors [BR:onl03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100691565
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     100691565
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100691565
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100691565
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box Cupin_8 JmjC PHD
Other DBs
NCBI-GeneID: 100691565
NCBI-ProteinID: XP_003453933
Ensembl: ENSONIG00000013875
LinkDB
Position
LG7:22396078..22423154
AA seq 1390 aa
MAQAAETCAESGRRLRSISRTMYDENEDLSDVEEIVNIRGFSVEEKVLSDSYSADFVRVM
EGKDFTYEYVQREGLRIPLIFKEKDQLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPGL
KQSQTEATNIISEMKYPKVQRYCLMSVKGCYTDFHVDFGGTSVWYHVFKGQKVFWLVPPT
PYNLALYEDWVLSGKQSDVFLGDRADGCQRVELQQGYTFFIPSGWIHAVYTPVDTLVFGG
NILHSFNIPMQLTIYEIENRTKVHSKFRFPFYYEICWYVLERYLHCLTKRSYLSQEIRKE
SMDFETKSKTESPSSDSRSQDMNEDSCGTHVRDEQGEKLERVPQDGPCTPDNGKAQHLKA
VLSIDSEDSCNPSSASLDFPKTPSDSPNSEPQNKWIHLTEFELNGLRTLIEKLESLPENR
KCIPMGIENPQALLDDLKVVLKEHTNDDPKLAITGYPVVYWPKKTIKPRPPNRPKPKMAA
SPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMR
QCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKIKDSNGVV
NDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPDLPMVAPT
PIPALTTTSAVKRKVERDVIAKKNDEEPPKKRPPLLSLEGIPRPRLEDNPLRKKRKLFDT
NDEPSFVKKKKKLSKPDDSFTSKLLQHIKRENDHGDEEDDQEDHEEDGLSLERMHLREKN
EYDDEDQDGDAEEEVTVKKERDNNAEDKAKVLLSPLLRTSAARESDQTSSNSPRAGPSGE
SGEAQERSSAQLKARHQRKRLPNKEASKEFSQETPKIEDCLSSQKLGSVKKEEDSPANLN
RRPLKTEDSLTNQNRKPLKTEDPPANPSRKALKMEEGVNNQNRLPLKTEDSLTNQNQRPV
KSEPESEVDEQKPRWPLNNGSSDLGDWLRHRGREMNGTPRGYSPLGWNRNAPIAPICPRP
LPCRSPPKCIQMERHVIRPPPISPPPDRLPLNDGEAHVMQRETWMMVFGHLSHRDLCVCM
RVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSWLIN
RLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQL
DNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAGTTT
RDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVSVQFEL
IEDKLLQKIS
NT seq 4173 nt   +upstreamnt  +downstreamnt
atggctcaggccgcagagacgtgtgctgaatccggacgcaggctgcgctccatctcccgg
acgatgtacgacgaaaacgaggacctgtccgacgtggaggaaattgtaaacatcagaggg
ttcagcgtggaggaaaaggtcctcagtgacagctacagcgcagactttgtccgggtgatg
gagggtaaagacttcacttatgagtatgtgcaaagggaaggtctaaggatccctctcatt
tttaaagagaaagatcagttagggatcagaatgccagatccagaattcacagtcagtgaa
attaaaggactagttggcagtcgccggtctgtggacgttatggatgtgagcactcagaaa
ggctctgaaatgagcatggctcagtttgtccgctattatgagacgccagaggaagagcgg
gacaaactgttcaatgtcattagcttggagttcagccacaccaagctggagaacctcatc
aagcgtcccacagtggtggatcaagtggactgggtggacaacatgtggcctcctggtttg
aaacaaagccaaactgaagccaccaatatcatctcagagatgaaataccccaaagtgcaa
aggtattgtttgatgagcgtgaaaggctgctacacagacttccacgtcgattttggggga
acttcagtttggtatcacgtattcaagggacagaaagtgttctggcttgtgcctccaact
ccctataaccttgccctgtatgaggactgggtcctgtcaggcaagcagagtgatgtcttc
ctgggagaccgagctgatggatgccagagagtggagcttcaacaaggatacaccttcttc
atcccatctgggtggatccacgctgtctacactcccgtggacacactggtgtttggaggc
aacattctgcacagctttaacattcctatgcagcttaccatctatgagatagagaacagg
acaaaggttcattccaagtttcgtttccccttctactatgagatatgctggtatgtcctg
gagagatacctgcactgccttaccaaacggtcctacctttctcaggagatccgtaaagaa
tctatggattttgagacaaagtcaaagacagaaagcccctcctctgactccaggagtcaa
gacatgaacgaggactcgtgtgggactcatgtcagagatgagcagggtgaaaaactagag
agagttcctcaggatggaccctgcacacccgacaatgggaaggcccaacatctcaaggct
gttttatccatcgactctgaggacagctgtaaccccagctcggcctctttagatttcccc
aaaactccttcagactctccaaactcagagcctcagaataaatggattcatctaacagag
tttgaactgaatgggctaaggacgctgattgagaagctcgagtcactcccagaaaatagg
aaatgtattccaatgggaatagagaacccccaagcgctgttggatgacttaaaggttgtc
ttaaaggaacataccaatgatgaccccaagttagccatcactggatatcctgtggtgtac
tggcctaagaaaaccataaagccccggcctcccaaccggccgaaacctaagatggcagca
tctcccgcatcagcggtcaagctgtcggccagccggggtacatctggagccaggaggaga
cggacacgctgtcggaaatgcgaggcgtgtctgcggacggagtgcggagagtgtcacttc
tgcaaagacatgaagaagttcggcgggccaggacgcatgaagcagtcctgtatcatgagg
cagtgcattgctcccgtcctaccccacacagcagtgtgtctcgtctgtggcgaggcaggc
aaggaggacaccgtggaggatgaggaagagaagtttaaccttatgttaatggagtgttcc
atctgtaacgagatcgttcaccctaactgtctcaagattaaagattcaaatggagtagtc
aatgatgagctgccaaactgctgggagtgcccaaaatgtaaccatgctgggaaaactgga
aaacaaaaaaggggcccagggtttaagtatgcatccaaccttcctggctcgctgctcaaa
gaaccgaggttaaaccgagattcaaaggaagagccagacctacccatggtggctccgaca
cctattcctgccttgactaccacatctgctgtgaagaggaaggtggaacgggatgtaatc
gcaaagaaaaatgacgaggagcctcctaaaaaacgcccccccttgctttctctagagggt
attccccggccgagattggaggacaatcctcttaggaaaaagaggaaactttttgacaca
aatgatgagcctagctttgttaaaaagaagaagaagctttcaaaaccggatgattcattt
acttcgaagctgcttcagcatattaagagagagaatgatcacggtgatgaagaagacgac
caggaggatcacgaagaagatgggctgtccttggagaggatgcatttaagggagaaaaat
gagtatgacgatgaggaccaagacggggacgctgaggaagaggtgacggtgaaaaaagag
agggacaataatgcagaggacaaagctaaggtccttctaagcccgctgctgagaacgtcc
gcagcccgagaaagtgaccagacatcctccaactctcccagagcgggaccaagcggtgag
tcgggagaagcccaagagagaagctccgctcagcttaaagcacgacatcagcgtaagcgg
ctcccaaacaaggaggcgagcaaagagttcagccaggagactccgaagatagaagactgt
ctgagcagccagaagctgggctcagtgaagaaggaggaggacagcccagccaacctcaat
cgtcgaccacttaagaccgaagactccctgaccaatcagaaccgaaaaccactaaaaact
gaggacccacctgctaatccgagccgtaaagcccttaaaatggaagaaggcgtaaacaat
caaaacagactgccgctgaaaacagaagacagcttgaccaatcagaatcaaaggccagtg
aaatctgagcccgagagtgaagtggacgaacagaagcccaggtggcctcttaataatggc
agcagcgacctgggcgactggctgcgacaccgggggcgggagatgaacgggacaccgcgt
ggctactcgccgctcggttggaacagaaacgcaccgatcgcaccaatatgccctcgaccg
cttccctgccggtcgccaccgaagtgtatccaaatggagcgccacgtgatccggccccct
cccatcagccccccgcccgacagactgcccctgaatgacggcgaagcgcatgtgatgcag
cgagagacctggatgatggtgttcggtcacctcagtcacagagatctctgcgtctgcatg
cgtgtctgccggacctggaacagatggtgctgtgacaaaaggctctggaagcacatcaat
ctgaaccgctgcaaatccatcactcccctgatgctgagcgggatcatccgcagacagccg
gtagccctggacctcagttggaccaacatttccaagaagcagctcagctggctcatcaac
agacttccaggtctacgtgtgctgcttctctctggatgctcatgggtagccgtctctgct
ctctgcacctccagctgtcctctcctgcgaactctggatgttcagtgggtcgagggactg
aaagacgctcagatgagagacttactgtcgcctcccacagataataggccaggtcagttg
gacaacaggagtaaactgcgtaacgtagaggacctgcgtctggcagggttggacatcacc
gacacgtctctgcgcctcatcattcgttacatgcccctcttatctaagctggacctcagc
tactgcaaccacgtcactgaccagtcggttaacatcctgactgctgcggggacaaccacc
agagactcactcactgacatcaatctgtcagtctgtaacagggtcacagaccagtcgctg
acctatttcaagcgctgtggaagcatttgccatatcgacctgcgatactgcaaacaggtg
accaaggaaggatgtgaccagttcatcgccgaaatgtccgtcagtgtgcagtttgaactc
attgaggataaactgctgcagaagatcagttag

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