Oreochromis niloticus (Nile tilapia): 100692000
Help
Entry
100692000 CDS
T06104
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain
KO
K06752
MHC class II antigen
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04145
Phagosome
onl04514
Cell adhesion molecule (CAM) interaction
onl04672
Intestinal immune network for IgA production
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100692000
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100692000
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100692000
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100692000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100692000
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100692000
Exosomal proteins of epithelial cells
100692000
Exosomal proteins of breast milk
100692000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
Ig_3
C2-set_2
ig
Motif
Other DBs
NCBI-GeneID:
100692000
NCBI-ProteinID:
XP_005453674
LinkDB
All DBs
Position
LG5:complement(14584127..14590673)
Genome browser
AA seq
245 aa
AA seq
DB search
MALSVIALILSAGAACGYIQTQSHNFHYIYGCYESDDVRVDAVVDDDVVAYADFNKEEVV
WVLPHLPQPAKDFKKMAYGVAKASTAHCHSVLGKAKNADPGAPLRQDPPDIYIYTRYEGE
ASVMNTLFCVANHFYPPTINFTWTKNGVELTEGVANLRYRHNRDGTFHMISTLLFTPQPG
DHYICTVEHQAAKVPVSKSWELKENKMSRVSPEAVFFGVSVVLCLIGFGTGVFFFIKQPN
ECLQI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctctttctgtgattgcactgattttaagtgctggagctgcttgtggatatatacaa
acacagtcccacaacttccattacatctatggatgctatgaatccgatgatgtgcgggtg
gacgctgttgttgacgacgacgtggttgcatacgccgatttcaacaaggaagaggtagtg
tgggtgttacctcacttgccacaacctgcaaaagacttcaagaaaatggcttatggagtc
gccaaagccagcactgcacactgtcacagcgttttgggtaaagcaaaaaatgctgatccc
ggtgctcccctacggcaagatcctcctgacatctacatctatacccggtatgagggggag
gccagtgtgatgaacactctcttttgtgtggccaaccacttctacccacccaccatcaac
ttcacatggaccaagaatggagtggagctcacagagggtgtggcaaacttacgctatcgt
cacaatcgtgatgggacattccacatgatttctacgcttctgttcactccacagcctgga
gaccattatatctgcacggtggagcatcaagctgcaaaagtgcctgtcagcaagagctgg
gagttgaaggaaaacaagatgagcagagtgagccctgaagccgtgtttttcggtgtgagt
gtcgttttgtgcctgataggattcgggaccggagtcttctttttcatcaagcagccaaat
gaatgtcttcaaatttga
DBGET
integrated database retrieval system
