KEGG   Oreochromis niloticus (Nile tilapia): 100692549
Entry
100692549         CDS       T06104                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain isoform X1
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecule (CAM) interaction
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    100692549
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100692549
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100692549
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100692549
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100692549
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100692549
  Exosomal proteins of epithelial cells
   100692549
  Exosomal proteins of breast milk
   100692549
SSDB
Motif
Pfam: C1-set Ig_3 MHC_II_alpha Ig_2 C2-set_2 I-set ig
Other DBs
NCBI-GeneID: 100692549
NCBI-ProteinID: XP_003451057
Ensembl: ENSONIG00000006121
LinkDB
Position
LG11:complement(20240076..20241780)
AA seq 250 aa
MSHHTTDMKHAPLLILILNNFCVFSQIPHEMTYVVGCFVQGLTEVQFEFDGEEFLYADFP
KEEIVYTVPKFIFPDPSHVLVGLSILKDALDNRDWCLIITKIAAMEEKYPPEEKDPPEIV
LFSSDKVELGVENSLICLVNHFYPPSINVTWTKNGHPVSTGVSLSRYFPNKDQTFHQLST
LTFTPSEGDFYSCTVEHSALETPQTRIWEAEVTNSDQSLGPVIFCGVGLSLGLLGITVGV
FFFVKGHQRQ
NT seq 753 nt   +upstreamnt  +downstreamnt
atgtcacatcacacaacagatatgaagcacgctcctctcttaatcctcatactcaacaac
ttctgtgtcttctcacagattccccatgaaatgacctacgtagtgggctgtttcgtccaa
ggcctgacagaggttcagtttgagtttgatggcgaagagtttttatacgctgatttccca
aaagaagagattgtctacactgttcccaaatttatttttcccgatccgagtcatgttttg
gtgggtttgagtatccttaaagatgctttggacaacagggactggtgtttaataattact
aaaattgctgcaatggaagagaagtatccaccagaagaaaaagaccctccagagattgtc
ctcttctcttctgacaaagtcgagctgggagtagaaaacagcctgatctgcttggtgaat
catttctacccaccttccatcaatgttacctggaccaaaaatggccatccggtgtccacg
ggggtgtcactcagtcggtatttccctaataaagatcaaaccttccaccagttgtccact
ctgacattcacaccgagtgaaggagacttttacagctgcactgttgagcactcggcactg
gaaacaccccaaacaagaatctgggaagctgaggtcacgaacagtgatcaaagtcttgga
ccagttattttctgtggagtgggactgagtctgggcttactgggaatcacagtcggagta
tttttctttgtaaagggacaccaacgacagtaa

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