Oreochromis niloticus (Nile tilapia): 100693505
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Entry
100693505 CDS
T06104
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl00900
Terpenoid backbone biosynthesis
onl01100
Metabolic pathways
Module
onl_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100693505 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
onl01006
]
100693505 (ggps1)
Enzymes [BR:
onl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100693505 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100693505 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
100693505 (ggps1)
Prenyltransferases [BR:
onl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100693505 (ggps1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
100693505
NCBI-ProteinID:
XP_003441242
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All DBs
Position
LG13:23677313..23692798
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AA seq
315 aa
AA seq
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MDHGTEAAADRILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLVLEHPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDT
LGLFFQIRDDYANLSSREYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLRELEMEAYRLIREFGGNPQLESLVKHLSQMHHEAE
ATAESSGEPPSSQNH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaccatggcacggaggctgctgctgaccgaatcttgctggaaccatacaaatacttg
ttgcaactgccaggaaaacaagtgagaacaaaactcgcccaagcgtttaaccactggctc
aatgttcccgaggacaaactgcaggtgatcattgaggtgactgagatgctacacaatgcc
agcctgctgatagatgacattgaggatagctccaagctgcgtcgaggcttccctgtggca
cacagcatctatggcattccttctgttatcaactcggccaactacgtctacttcctgggg
ttggagaaggtgctggtcctggagcaccctgaggctgtgcgagtgtttacccgtcagctt
cttgagttgcatcgcggtcagggcctcgacatccactggagagacacctacacctgtccc
accgagcaggagtaccgcaacatggtgctgcagaagacaggagggctgttcggcctcgct
gtaggtctgatgcagctcttctcagactggaagcaggacctgaaacccctcttggacaca
ctgggcctttttttccagatccgtgacgactacgccaacttgagttcccgtgagtacagc
gagaacaagagtttctgcgaggacctgaccgagggcaagttctccttccccaccattcat
gccatatggtcacgtccggagagcactcaggtgcagaacatcctgaggcagcgcacggag
aacatggacatcaaacgatactgcgtggactacctggaaaaggtgggctcatttgcttac
acccgccagactctgcgggaactggagatggaggcctaccggctcattagggagtttggg
ggaaaccctcagctggagagcctggtcaaacatcttagccagatgcatcacgaggccgag
gccacagccgagtctagcggtgagccgccctccagccaaaaccactga
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