Oreochromis niloticus (Nile tilapia): 100695603
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Entry
100695603 CDS
T06104
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
onl04510
Focal adhesion
onl04540
Gap junction
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
onl01001
]
100695603 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
onl04090
]
100695603 (pdgfrb)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100695603 (pdgfrb)
Protein kinases [BR:
onl01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
100695603 (pdgfrb)
CD molecules [BR:
onl04090
]
Proteins
100695603 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Adeno_E3_CR1
C2-set_2
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
100695603
NCBI-ProteinID:
XP_005467820
Ensembl:
ENSONIG00000013070
UniProt:
I3K5P3
LinkDB
All DBs
Position
LG2:25214060..25242032
Genome browser
AA seq
1104 aa
AA seq
DB search
MRKVTASPLHLTVTFTALLCFCTELRCLEITPGDKEFVLAKGSSLTLTCSGSGETTWKFK
MDDVPYFQLEPSKPGHRSYEIVQSGATSSVLTLFNVSWKHTGVYQCVDQRTQDTEEVAVF
VPDPDVWFIESSHGMVTKTSEESTIPCVVTNPKITVTLHERDTDIPVSGVYVPSEGYKAP
VEDRNYVCRGELNGEERESQDFYVISIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGLE
LVNFSWDIPNRGLDFYEPLTDVLSPTSMRSCLIFSQATVDHSGKYVCHVHEGIQDQSASA
SVNITVLENGFVDIKPPQQRNISVKLQENVELRVAMEAYPPPQVYWTKDGATIKGDKIIT
MRQEHEISYVSVLTLVRVRTDQKGLYTVLVTNGDDTKEMTFDLEVQVPAQIKDLTDHSLK
GKRHLVTCVAEGVPAPTIQWYSCGSMLKCSNQTEVWKPLTPEPEVLSIHTNVSYNETRKV
SQVRSQLTFQTPQQVIVRCETSNQEGLISRRDIKLVFSSLFSQVAVLAAVLALVVIVIMS
FIILIAIWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMRRDHLVLGRTLGS
GAFGRVVEATAYGLTDSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLL
GACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDYSCLISRGSTPLSQRKGY
VSFGSESDGGYMDMSKDEPSVYVPMQEQIDSIKYADIQPSPYESLYQHGFYQEQGGNSLD
LVISDSPSLTYEDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR
DIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPM
NELFYSALKGGYRMAKPTHASDEVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLTDSYKKK
YNQVNENFMKSDHPAVARTKPRLTSPFPVANPAFGTPSPVTLQSPLDAYNQNSRPRQDFR
QEAQEVIPSYNEYIIPIPDPKPEDAFTDMPSESPGSSVGLGAETDSMSQDTADTLPEEDR
LEETSERDALLGSSGTPEVEDSFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggtgacagcatccccgctccacctgacagtcacatttacagctctgctgtgt
ttctgcactgagctgcgctgcctggagatcacgcccggcgacaaagagtttgttctggcc
aagggctcctctcttacccttacctgcagcggctcaggggagaccacgtggaagtttaag
atggacgacgtgccgtactttcagctggaaccatctaaaccgggtcaccggagctacgag
atcgtgcaaagcggagccacatccagcgttctgacattgttcaatgtgagctggaagcac
acaggcgtgtatcagtgcgttgatcagcgcactcaagacacagaggaggtggctgtgttt
gtcccagatcctgacgtgtggttcatagagagctctcacggcatggtaacaaagaccagt
gaggaaagcaccatcccctgtgtggtcaccaatccaaaaatcactgtcaccttgcacgag
agggacactgacatacccgtaagtggggtgtatgttcctagtgagggctacaaggcgccg
gtggaggacaggaattacgtgtgtcggggagagctgaacggggaagagagagagtctcag
gacttctatgtcatcagcattgtggtcccagaggccattgacgcctacatcaatgcttcg
aagacggtcctgaagcagggtgaaccactgacagtaaactgcacagtgcacggactggag
ctggtgaatttttcttgggatattcccaacagagggcttgacttctacgagccactgact
gatgtcctgtcccccacgagcatgcgctcctgcctcatcttctcccaggccacggtggac
cacagtggaaaatatgtctgccacgtccatgagggtatacaagaccagagcgcctctgcc
agcgtcaacatcactgtgcttgaaaacggctttgtggacatcaaacctcctcagcaacga
aacatttcagtcaagctacaagagaacgtggagctgagagtggcgatggaggcgtaccct
cccccacaggtttactggaccaaggatggtgccaccatcaagggagacaaaatcatcacc
atgagacaagagcatgaaataagttatgtcagtgtcctcaccttggtgagggtgaggaca
gaccagaagggcctctacactgtccttgttaccaatggagatgacacaaaggaaatgacc
tttgacctggaggtccaagttcccgctcagattaaagacctgactgaccacagtctcaaa
gggaaaagacacttggtgacctgtgttgctgaaggggtcccagccccaaccatacagtgg
tacagctgtggcagcatgctcaagtgtagcaaccagacagaggtgtggaagccgctgaca
ccagagccagaggtgctgagcatccatacgaacgtgagctacaatgagacaagaaaggtc
agtcaggtgcgcagccagctgaccttccagacacctcagcaggtcatagttcggtgtgag
accagcaaccaagaggggctcatcagcaggcgggacatcaaactggtattcagctccctt
ttctcccaggtggcagtgttggctgctgttttagctttagtggtcattgttatcatgtct
ttcatcatcctcattgcaatctggaggaagaaacctcgctatgagatcagatggaaggtg
atagaatctgtcagccaggatggacatgagtatatctacgtggatcccatccacctgccc
tatgacctggcctgggaaatgcgtcgtgaccacctagtgctgggtcgcactcttggatca
ggagcgtttggcagggtggtcgaggcaactgcatatggtctcacagattcgcagtcaagc
acaaaggtggcagtgaaaatgctgaaatctacagcgagaaggagcgaaactcaggccctg
atgtcagagttaaagatcatgagtcacctgggtcctcacctcaacatcgtgaacttgcta
ggggcttgtaccaaacatggccctctgtacctggtgactgagtactgtcgctatggcgac
ctggtggattacctgcacaggaacaagcacacgttcctgcagtactatgctgagaaaaac
caggactacagctgtctcatctccagaggaagcacccctctcagccagaggaaaggctat
gtgtctttcggaagtgagagtgatggaggatacatggacatgagcaaagatgagccctca
gtctacgttcccatgcaagagcagatagattccatcaaatatgcagatatccagccttct
ccgtacgagtctctctaccaacacggcttctaccaggaacaaggaggcaacagtttagac
ctggtgatcagcgactctcccagtctcacctacgaagatcttttaggattcagctaccaa
gtggcaaaggggatggagttcctcgcctctaagaactgcgtccatcgtgacctggctgcc
aggaacgtcctgatctgtgagggcaaactggtgaagatttgtgacttcggcctggccaga
gacatcatgcatgactccaactacatctccaaaggcagcactttccttcccttgaagtgg
atggcacctgaaagcattttccataatttgtataccaccctaagcgatgtgtggtcatat
ggcattcttctttgggagattttcacactgggagggaccccctaccctgatttgcccatg
aatgaattattctacagtgctttgaagggaggctaccgaatggccaaacccacccatgcc
tccgatgaagtttatgagattatgaagaaatgctgggatgaaaagtttgagaaaaggccc
gagttctcatttctggtccacagcgtggggaatatgctgacagacagctataaaaagaaa
tacaaccaagtcaatgaaaacttcatgaagagtgaccacccggcagtcgcccgcaccaaa
cctcggctgacctcaccctttccagtcgccaacccagcatttggcaccccatctcctgtc
acactccaatctccactggatgcctacaaccaaaactcaaggcctagacaagacttcaga
caagaggcacaggaagtcataccgtcatacaacgagtacatcattcccattccggacccc
aagccagaagacgctttcactgacatgccgtcggaaagtcctggaagctctgtgggtctg
ggggcggagaccgactccatgtctcaggacactgctgacacccttccagaggaggaccgg
ctggaagagaccagcgagagagacgctctgttgggctcctccgggacacccgaggtagaa
gacagcttcctgtag
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