KEGG   Oreochromis niloticus (Nile tilapia): 100697211
Entry
100697211         CDS       T06104                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100697211 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onl03041]
    100697211 (smndc1)
Spliceosome [BR:onl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100697211 (smndc1)
 Complex B
    100697211 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100697211 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 DUF2730 PUA_4
Other DBs
NCBI-GeneID: 100697211
NCBI-ProteinID: XP_003438322
Ensembl: ENSONIG00000000434
UniProt: I3IVB0
LinkDB
Position
LG13:14406422..14411227
AA seq 238 aa
MSEDLVKQLSNYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPAETVAK
TSGSDTVPVKHGWKVGDRCLAMWSQDGQIYEAEIEEIDRDNGTAAVTFTGYGNAEVIPLQ
NLKAVEEGKLLEEDGSVKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggacttggttaaacagttgagcaactacaaagcccagctgcagcaagttgaa
gtcgctctttctactgatccagacaatgaagaccttcttaaactccaaaaagacttacag
gaagtcattgatttgacaaaagacctcctgacctcacagccggcagagactgttgccaaa
acaagtggctcagacacagttcccgtgaagcatggctggaaagtgggagacaggtgtctg
gctatgtggagtcaggacggacagatttatgaagctgagattgaggagatagaccgagac
aacggcactgcagccgttaccttcactggatatgggaatgctgaagtgattcctctacag
aacctcaaggcagtagaggaaggaaagcttttggaggaggatgggagtgtaaagccaaag
tcgaggaaagagcagatagcagagcagagggagtataaaaagaaaaaagctcagaagaag
gtacagaggatgaaggagctggagcaagaacgagaggaacaaaagtcaaagtggcagcag
ttcaacaataaagcctactcaaagaacaagaaaggccaggtgaagaggagcatatttgca
tctcccgaaagcgtcaacggaaaggtgggagtgggaacgtgtggtattgcagacaagcct
atgacccagtaccatgacacgtccaaatacaatgtcagacatctaatgccacaatga

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