KEGG   Oreochromis niloticus (Nile tilapia): 100697308
Entry
100697308         CDS       T06104                                 
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04010  MAPK signaling pathway
onl04137  Mitophagy - animal
onl04141  Protein processing in endoplasmic reticulum
onl04210  Apoptosis
onl04217  Necroptosis
onl04621  NOD-like receptor signaling pathway
onl04622  RIG-I-like receptor signaling pathway
onl04920  Adipocytokine signaling pathway
onl05132  Salmonella infection
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100697308
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100697308
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100697308
  09143 Cell growth and death
   04210 Apoptosis
    100697308
   04217 Necroptosis
    100697308
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100697308
   04622 RIG-I-like receptor signaling pathway
    100697308
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100697308
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100697308
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100697308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100697308
   04121 Ubiquitin system [BR:onl04121]
    100697308
Enzymes [BR:onl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100697308
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100697308
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100697308
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 Sina_ZnF zf-C3HC4_4 zf-C3HC4_2 zf-RING_4 EFL1 MATH FKBP15 zf-RING_6 zf_C2HC_14
Other DBs
NCBI-GeneID: 100697308
NCBI-ProteinID: XP_013122127
Ensembl: ENSONIG00000010405
LinkDB
Position
LG12:complement(3288121..3311255)
AA seq 580 aa
MSSFVHKQSRGIMAAQEPSPPSSLEGNKPGFPKKILANNLEDKHLCNSCQKILRRPLQAQ
CGHRFCSFCFNKIVSCGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCP
NEGCTWTGTVKEFEASHEGNCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKE
PFLLKNIKAHDEICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVE
KEKIHDHERQCSYEHLNLLLHFIMGIKVSLESLQPQSLEVASQKLQELHQSLRDLELKMS
QLGGCVAAPVQGACAPTLTTSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVST
FENIVCVLNREMERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGK
MREMSAATYDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGT
GRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVS
DMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgtcgtcatttgttcataaacaaagcaggggaataatggctgcacaggagccgtctcca
ccatcttccctggaaggtaacaaaccgggcttcccaaagaaaattttggctaacaacctg
gaggataagcatttgtgcaactcgtgtcagaaaatcctgagaaggcccctgcaagcccag
tgcggtcaccgcttttgttcgttctgtttcaacaaaattgtgagttgtggaccacagaaa
tgcagtgcatgcatcaaagaagacctgtttgaggaacccacctcgatccttaagcaaggt
ggtgctttccctgacaatgcagcccgcagagaagtggaggccttggcagctgtctgtccc
aatgaaggatgcacatggactggaactgtcaaagaatttgaggccagccacgagggcaac
tgtgacttcatgatcatcctctgtccttcctgtaaagagctcatgagagccaacgagcag
gaacgccacaatgagagagagtgtccggagagaacgctcaactgcaaatactgcaaagaa
cccttcctgttaaagaatatcaaggctcatgatgagatctgtccaaagtatcctatgatt
tgtgaaggttgtgcgaagaaaaagatccccagagaaaagtatgtggaccatattaagttc
tgcagtaaatttaaagctccatgcagatttcatgttgttggctgcgatacgtctgtggag
aaagagaagatccatgaccatgagcgccagtgttcgtatgaacaccttaacctgcttctg
catttcatcatgggcatcaaggtgagcctggagagcctgcaaccccaaagcctggaggtg
gccagccagaagctgcaggagctccaccagtccctcagggatctggaactcaagatgagc
cagctgggtgggtgtgttgcagctcccgtgcagggagcatgtgccccgaccctaaccaca
tccttcaccccgctgcccagtgccatgggtgccgctttggaactgcagctacagagtgaa
aaaaccaaagtggctgagctaagccggcgctgccaggagctggagctcaaagtgagcact
ttcgaaaacattgtctgcgtcctcaaccgcgagatggagcgctcctgcaccaccatggag
gcctacaaccgccaacacagactggatcaggacaagattgaaatcctcaataataaggtt
cgtcagctagagaggacggtgagcctgagggacctgtccattgtggagatggaggggaaa
atgagagaaatgtccgcagccacttatgatggcatatttgtctggaagatctctgatttc
accaagaagaggcaggatgctgtggctggccgggcccctgctatgttctctcctgccttt
tataccagtaaatatggctacaagatgtgcttgcggatctacctgaatggtgatgggacg
gggcgaggcacccacctgtctttgttctttgtggtgatgagaggacacagtgatgcactc
ctcaagtggccttttaatcaaaaggtcaccctcatgctgctcgaccagaacaacagggag
cacataattgatgccttcaggcctgacatttcatcctcatccttccagaggcctgtcagc
gatatgaacatcgccagtggttgtccgctcttctgtccgctctcaaagctggactctaaa
aactcctatatacgtgatgacaccattttcatcaaagccattgtagacctaacaggcctt
tag

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