Oreochromis niloticus (Nile tilapia): 100698251
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Entry
100698251 CDS
T06104
Name
(RefSeq) plakophilin-1 isoform X2
KO
K10387
plakophilin 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100698251
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
100698251
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
100698251
NCBI-ProteinID:
XP_003453705
Ensembl:
ENSONIG00000014703
LinkDB
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Position
LG5:9322507..9333638
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AA seq
730 aa
AA seq
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MSKGNPLKSVISIGNVDDTSLAMPSVNQNRSAQQRVLEQVQSMKRTKSKSSTSSRSGSTT
LSPTSPSFDSVFEEIPKSPQSTNGIMLLKNGYSRSLSYEKNSTQQKANISQGSSVNRYTV
SSAYQYKSHYAPVGPMGVGQSNSSRSEPNLVLHQRTVPSRSGPSKRIQTMKIGAGRSQRA
TSQFITRTTVPQPQYAANSQTKANNQFICSRIDTVKAPKPTVTEPASKSKMDSGSNGNAK
IDKADITMKEAVDYLASDEETYQHCGASYIQHNTFIDDKAKEEVLKLNGIPPLVNLLRSP
SLQVTSTVSAALRNLSFKNEKNKEEIQRCGGITQAVALLKDVNSLDLQKQLTGLLWNLSS
VDHLKPELLKSALPVLMERVILPYTTGPNQLNGNSKDSDIFFHTTGCLRNLSSSKQSYRQ
TMRKCRNLIDCLVAYIKECVQTGKEDDESVENCVCILHNLTFHLEAEAPELFIRINALGK
SIYRSNSQDNISPIGCFSTRSKSLEREYHFDFPVVEESQPAGASWLFHSKTLESYLFLLG
SSQREETREACCGILQSLTAQEGLVSRAIGQTIVQKLNGLQVISPLLNSEKVNLQRSTVG
LIANLTKNPVLHSAISRKGLPELLVILSNGTTGGNESDDTLAMACQAASCLFMKNPEMNK
NLLNNKLISSLNDLSKNIYFPKSSKASALFLYKLWSDKDLQSFLKRQGMSKSLFVNDITM
AAQRSLQVVD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggaaacccgctcaaatctgtcatttccatcgggaatgtggacgacacgtca
cttgcgatgccgtcggttaaccagaaccgaagcgcacagcaacgtgtcctggagcaagtt
caaagtatgaagcggacaaagtcgaagtccagcaccagcagcaggagtggatctactact
ttgtctccaacaagcccttcgtttgactctgtgtttgaggaaatcccgaaatcacctcag
agcacaaatggaattatgctccttaagaatggctactctagaagtctcagctatgagaaa
aacagtacccagcaaaaggccaacatctcccagggatccagtgtgaacagatacacagta
tcttctgcctatcaatataagagtcactatgcccctgttgggcctatgggagtcggtcag
agcaacagcagccgcagcgagcccaatctggtattacatcagcgcaccgtgccgtcacgt
tcgggcccatcaaagagaatccaaaccatgaagattggtgccggcaggtcacaaagagcc
accagccagtttataacgaggaccacagtaccccaaccgcagtatgctgcaaacagtcag
actaaagcaaacaatcagttcatatgcagtcgaattgacacagttaaagccccaaagccc
accgttaccgagcctgcatccaaaagcaaaatggattctggctccaatggaaatgccaaa
attgataaagctgatattactatgaaggaggctgtggactatctagccagcgatgaggag
acgtatcagcactgtggagcttcctacatccagcacaacactttcattgatgacaaagct
aaagaggaggtcttaaagcttaatggcattcctccgttggtgaatctgctgcgcagcccc
agtttgcaagtcacctctacagtctcagctgctcttcgtaacttgtccttcaaaaacgag
aaaaacaaagaggagatacagcgctgcggtggcatcacacaggctgttgctctgctcaaa
gatgtaaactctttagatcttcagaaacagctgacaggtcttctgtggaatctgtcttct
gtagaccatctgaagccagagctgttgaagagtgcactgcctgttttaatggagcgtgta
attcttccttacacaacaggtcccaaccagctcaatgggaacagtaaagattctgacatc
ttttttcacaccacaggatgtcttagaaacctcagtagttctaagcaaagctacagacag
acaatgagaaaatgtcggaatctgatcgactgtttggtcgcttatatcaaagagtgtgtg
caaacaggaaaagaagatgatgagtcagttgaaaactgtgtgtgcatcctgcacaatctg
acattccacctggaggccgaggctcctgagctgttcatcaggatcaatgctttgggtaaa
agcatatacaggagcaacagccaggacaatatcagtcccatcggttgtttcagcactcgg
agcaaatcattagaacgtgagtatcactttgacttcccagttgttgaagagtcacaacct
gctggggcaagctggctgtttcattccaaaaccctggagagttacctgtttttgcttggc
tctagccagcgagaagaaacacgggaagcctgttgtggaatattgcagagtctcactgca
caggaaggcctcgtctccagggcaattggtcagaccattgtacagaaactgaatgggctt
caggttatcagtcccctcttgaattcagaaaaagtcaacctgcagaggagtacagtgggt
ttaatagccaacttgacaaagaaccctgtcctgcacagtgccatcagtcgtaaagggctt
ccagagctgctggttatcctcagcaatggcaccacgggagggaatgaatctgatgatact
cttgccatggcctgtcaggctgccagctgcctgtttatgaagaatcccgagatgaacaag
aacttattaaacaacaagctgataagctccctgaacgatctcagcaaaaacatatacttc
cctaaatccagcaaagcgtcagccctgtttctctacaaactttggtcagacaaagattta
caaagcttcctgaaacggcaagggatgagcaagtccttatttgtgaatgacatcaccatg
gcggcacagcggtcacttcaagttgttgattaa
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