KEGG   Oreochromis niloticus (Nile tilapia): 100698680
Entry
100698680         CDS       T06104                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100698680
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100698680
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100698680
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100698680
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100698680
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100698680
  Exosomal proteins of epithelial cells
   100698680
  Exosomal proteins of breast milk
   100698680
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 DuoxA AD C2-set_3
Other DBs
NCBI-GeneID: 100698680
NCBI-ProteinID: XP_005471581
LinkDB
Position
LG8:complement(2215914..2219489)
AA seq 252 aa
MDSSLMLLALASCVFTAHAAVHEETLFYSCSESGDGQVQLHYDGDQITYADFKKQHAVWT
APLLKDLETAILSWFFPLALDSRTRCEFYLDRAVRLDNSSMTLKAPAVVIYPMDEAETGK
NNTIYCHIRHFYPPSNNVTWTRNGIRVTEGVNLSNPYPQTDGTFNQLASFSFQPQSDDVV
ECSVQHQALSRPLITTWTLPMKPARSAAAWVCLSLGLLCIALGVIIFIISAKESLRHKLS
DFWRAAYQRVAG
NT seq 759 nt   +upstreamnt  +downstreamnt
atggactcgtctctgatgttactggctttggcttcctgtgtgttcacagctcatgcagct
gttcacgaagaaacgctgttctacagctgctctgagtctggtgacggtcaggtacagctg
cactacgacggagaccagatcacgtatgctgactttaagaaacagcatgcagtttggacg
gcccccttgctaaaagatctggagacagccatactttcttggtttttccctctagcttta
gacagcaggactagatgtgaattctatcttgacagagctgtgcgtctggacaacagttca
atgacattaaaagccccagcagtggtcatctatcccatggacgaggcagagacgggaaag
aacaacacaatttactgtcacatcaggcacttctaccccccctccaacaatgtcacatgg
accagaaatggcattcgggtgaccgagggtgtgaatctgagcaacccgtatcctcagacg
gatgggaccttcaatcagctggccagtttctctttccaaccacagtctgatgatgtggtg
gagtgcagtgtgcagcatcaagccctgagccgcccgctcatcactacatggacactgccc
atgaagcctgctagatctgcagcggcatgggtgtgtctttctttaggactcctgtgcatc
gctttaggagtcatcatcttcatcatctctgcgaaagagtccctccgacataagctatct
gacttctggcgggctgcgtaccagagggttgctggatga

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