Oreochromis niloticus (Nile tilapia): 100702821
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Entry
100702821 CDS
T06104
Symbol
pdgfa
Name
(RefSeq) platelet-derived growth factor subunit A
KO
K04359
platelet-derived growth factor subunit A
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
onl04510
Focal adhesion
onl04540
Gap junction
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100702821 (pdgfa)
04020 Calcium signaling pathway
100702821 (pdgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100702821 (pdgfa)
04540 Gap junction
100702821 (pdgfa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100702821 (pdgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100702821 (pdgfa)
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100702821 (pdgfa)
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Growth factors (RTK binding)
100702821 (pdgfa)
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
100702821 (pdgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
100702821
NCBI-ProteinID:
XP_003450102
Ensembl:
ENSONIG00000005157
LinkDB
All DBs
Position
LG4:complement(19952023..19969543)
Genome browser
AA seq
210 aa
AA seq
DB search
MRATLSYILLWTTYLLATAEEVEFPQELIDRLSHSEIHSISDLQRLLDIDWRGTGNDVIE
EPKHQKHHKHPNHHKNSSHHYGYYGDLKSSQLHSRRKRSIVEEAVPAVCKTRTVIYEIPR
SQVDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEV
FVRLEDHLECVCTSHHHAVEPSDPETVDVR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagagccacactttcctacatcctgctgtggacgacgtacctgctggccactgctgag
gaagtggagtttccccaagagctgatagaccgactgtcccacagcgaaatccacagcatc
agcgacctccagcggctactggatatcgactggagaggtacgggaaacgatgttatcgag
gagcccaagcaccaaaagcaccacaagcacccaaaccaccacaagaactcctctcatcat
tatggttactacggtgacctgaagagctcccagctgcacagccgacgcaagaggagcatt
gtagaggaggcagtcccagcagtgtgcaagacacggacggtgatctacgagatccccagg
agccaggtggatcccacgtctgccaacttcctgatatggccgccttgtgtggaggtgaag
cgctgcacgggctgctgcaacaccagcaacatgcgctgtcacccttcccgcaaacaccac
cgcaccgttaaggtagccaaggtggagtacgtgaggaggagacccaagttgaaagaagtc
tttgtgcggttagaagaccacctggagtgtgtatgcacatcacatcatcacgcggtagag
ccctcagatccagaaacggtggatgtgaggtga
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