KEGG   Oreochromis niloticus (Nile tilapia): 100702954
Entry
100702954         CDS       T06104                                 
Name
(RefSeq) interferon regulatory factor 3
  KO
K05411  interferon regulatory factor 3
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04620  Toll-like receptor signaling pathway
onl04621  NOD-like receptor signaling pathway
onl04622  RIG-I-like receptor signaling pathway
onl04623  Cytosolic DNA-sensing pathway
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100702954
   04621 NOD-like receptor signaling pathway
    100702954
   04622 RIG-I-like receptor signaling pathway
    100702954
   04623 Cytosolic DNA-sensing pathway
    100702954
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100702954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:onl03000]
    100702954
   04131 Membrane trafficking [BR:onl04131]
    100702954
Transcription factors [BR:onl03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    100702954
Membrane trafficking [BR:onl04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    100702954
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 100702954
NCBI-ProteinID: XP_005448377
Ensembl: ENSONIG00000020071
UniProt: I3KVY5
LinkDB
Position
LG8:complement(18006445..18013497)
AA seq 466 aa
MAHSKPLLIPWLREQINSNKYPGVQWTNPEQTKFCIPWKHALRQDSSDTDILIFKAWAEV
SGSGRANGDPSVWKRNFRSALRAKGFKMLDDKKNDAANPHKVFQWPDESASKANSCAGSQ
EQDGADLLAGLGISIQESQGVHYLEGCLLLPEDAVFSESAASPDILQECLKGMNIGPEAE
GTAGFEPPPEQQQLQNQVAIGGHPLPGQQQYPVMYEGAVTEAGLPEQPAHPIGGAEGGAY
DEQLAAQFLQTMQKTRDGDNFRTQFKISVYYRGVKVLEQMVENEAGVRLVYRTDLNGTVL
DHDSGLTIVSLPSPVAMVDQNQASLTQRILDMLGDGLEVGVSGQVVYSQRRGESKAFWSF
CKFDQSRQPQEISKLYPQPLYKFTDFVRGILGFIEGNGKECAPCSLFFCIGEKWPDPQCR
PWEKKLITVEVCLSSMELLKNMAVENGASSLKSVELQMSLEEMMEY
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctcattcaaaaccgctgctcatcccgtggctgcgggaacagattaacagcaacaaa
tatcctggtgtccagtggacaaacccagagcaaacaaagttctgcatcccgtggaaacac
gctttgagacaggactcctctgacactgacattctcatctttaaggcctgggcggaggtg
agcggcagcggccgggctaatggagacccctcagtctggaagaggaacttccgcagcgcc
ctacgagctaaaggcttcaaaatgctggatgacaagaagaatgacgctgctaacccccat
aaagtctttcagtggccggacgagtcagcgtcaaaagctaactcgtgtgctggatcccag
gaacaagatggggctgatttgcttgcaggtctgggcatttccattcaagagtcccagggc
gtccactatttagaaggatgtctcctccttccagaagacgctgtgttttcggaatctgct
gccagcccggatattctccaggagtgtctcaaaggaatgaacatcggccctgaagcagag
ggcaccgcaggctttgagcctcctcccgagcaacaacagctgcagaatcaggttgcgatt
ggtggacacccgttgcctgggcaacagcagtatccagtaatgtatgagggtgcagttact
gaagctgggttgcctgagcaaccagcacatccaattgggggagctgagggaggggcctat
gatgagcagttggcggcacagttcctacagacaatgcaaaagaccagagatggagataat
ttcaggacgcaattcaagatatctgtgtactacagaggggtgaaggttttggagcagatg
gttgagaatgaggctggagtgcgcttggtctacaggactgatctcaatgggacagttttg
gatcatgattcaggcctcactatagtctccctgccaagtcccgtagccatggtggatcaa
aatcaagccagcctcacccagcggattctggacatgctgggtgatggcttggaagttggc
gtgtcgggccaagtggtctacagccagcgacggggggaaagcaaagctttctggagcttc
tgcaaatttgaccagagcagacagccccaagagatttctaaactgtatcctcagcctctt
tacaagttcacggactttgtgcgaggaatattgggcttcattgaggggaacggtaaagag
tgcgctccctgctccttgttcttctgtattggggaaaagtggcctgacccacaatgcagg
ccttgggagaaaaaactcatcacagtggaggtgtgcctgtcttcgatggagttactcaag
aacatggctgttgaaaacggcgcctcctccctgaagtctgtggagctgcagatgtccctg
gaggagatgatggagtactga

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