Oreochromis niloticus (Nile tilapia): 100702954
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Entry
100702954 CDS
T06104
Name
(RefSeq) interferon regulatory factor 3
KO
K05411
interferon regulatory factor 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04620
Toll-like receptor signaling pathway
onl04621
NOD-like receptor signaling pathway
onl04622
RIG-I-like receptor signaling pathway
onl04623
Cytosolic DNA-sensing pathway
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100702954
04621 NOD-like receptor signaling pathway
100702954
04622 RIG-I-like receptor signaling pathway
100702954
04623 Cytosolic DNA-sensing pathway
100702954
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100702954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100702954
04131 Membrane trafficking [BR:
onl04131
]
100702954
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100702954
Membrane trafficking [BR:
onl04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100702954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100702954
NCBI-ProteinID:
XP_005448377
Ensembl:
ENSONIG00000020071
UniProt:
I3KVY5
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All DBs
Position
LG8:complement(18006445..18013497)
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AA seq
466 aa
AA seq
DB search
MAHSKPLLIPWLREQINSNKYPGVQWTNPEQTKFCIPWKHALRQDSSDTDILIFKAWAEV
SGSGRANGDPSVWKRNFRSALRAKGFKMLDDKKNDAANPHKVFQWPDESASKANSCAGSQ
EQDGADLLAGLGISIQESQGVHYLEGCLLLPEDAVFSESAASPDILQECLKGMNIGPEAE
GTAGFEPPPEQQQLQNQVAIGGHPLPGQQQYPVMYEGAVTEAGLPEQPAHPIGGAEGGAY
DEQLAAQFLQTMQKTRDGDNFRTQFKISVYYRGVKVLEQMVENEAGVRLVYRTDLNGTVL
DHDSGLTIVSLPSPVAMVDQNQASLTQRILDMLGDGLEVGVSGQVVYSQRRGESKAFWSF
CKFDQSRQPQEISKLYPQPLYKFTDFVRGILGFIEGNGKECAPCSLFFCIGEKWPDPQCR
PWEKKLITVEVCLSSMELLKNMAVENGASSLKSVELQMSLEEMMEY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaaaccgctgctcatcccgtggctgcgggaacagattaacagcaacaaa
tatcctggtgtccagtggacaaacccagagcaaacaaagttctgcatcccgtggaaacac
gctttgagacaggactcctctgacactgacattctcatctttaaggcctgggcggaggtg
agcggcagcggccgggctaatggagacccctcagtctggaagaggaacttccgcagcgcc
ctacgagctaaaggcttcaaaatgctggatgacaagaagaatgacgctgctaacccccat
aaagtctttcagtggccggacgagtcagcgtcaaaagctaactcgtgtgctggatcccag
gaacaagatggggctgatttgcttgcaggtctgggcatttccattcaagagtcccagggc
gtccactatttagaaggatgtctcctccttccagaagacgctgtgttttcggaatctgct
gccagcccggatattctccaggagtgtctcaaaggaatgaacatcggccctgaagcagag
ggcaccgcaggctttgagcctcctcccgagcaacaacagctgcagaatcaggttgcgatt
ggtggacacccgttgcctgggcaacagcagtatccagtaatgtatgagggtgcagttact
gaagctgggttgcctgagcaaccagcacatccaattgggggagctgagggaggggcctat
gatgagcagttggcggcacagttcctacagacaatgcaaaagaccagagatggagataat
ttcaggacgcaattcaagatatctgtgtactacagaggggtgaaggttttggagcagatg
gttgagaatgaggctggagtgcgcttggtctacaggactgatctcaatgggacagttttg
gatcatgattcaggcctcactatagtctccctgccaagtcccgtagccatggtggatcaa
aatcaagccagcctcacccagcggattctggacatgctgggtgatggcttggaagttggc
gtgtcgggccaagtggtctacagccagcgacggggggaaagcaaagctttctggagcttc
tgcaaatttgaccagagcagacagccccaagagatttctaaactgtatcctcagcctctt
tacaagttcacggactttgtgcgaggaatattgggcttcattgaggggaacggtaaagag
tgcgctccctgctccttgttcttctgtattggggaaaagtggcctgacccacaatgcagg
ccttgggagaaaaaactcatcacagtggaggtgtgcctgtcttcgatggagttactcaag
aacatggctgttgaaaacggcgcctcctccctgaagtctgtggagctgcagatgtccctg
gaggagatgatggagtactga
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integrated database retrieval system