Oreochromis niloticus (Nile tilapia): 100703551 Help Entry 100703551         CDS       T06104                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism onl  Oreochromis niloticus (Nile tilapia) Pathway onl04010   MAPK signaling pathway onl04120   Ubiquitin mediated proteolysis onl04140   Autophagy - animal onl04144   Endocytosis onl04620   Toll-like receptor signaling pathway onl04621   NOD-like receptor signaling pathway onl04622   RIG-I-like receptor signaling pathway onl05132   Salmonella infection onl05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:onl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100703551 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100703551 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100703551 (traf6)    04140 Autophagy - animal     100703551 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100703551 (traf6)    04621 NOD-like receptor signaling pathway     100703551 (traf6)    04622 RIG-I-like receptor signaling pathway     100703551 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     100703551 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100703551 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:onl04131]     100703551 (traf6)    04121 Ubiquitin system [BR:onl04121]     100703551 (traf6) Enzymes [BR:onl01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100703551 (traf6) Membrane trafficking [BR:onl04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100703551 (traf6) Ubiquitin system [BR:onl04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100703551 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 U-box BLI1 SlyX DUF7310 zf-TRAF_2 Motif Other DBs NCBI-GeneID:  100703551 NCBI-ProteinID:  XP_003450846 Ensembl:  ENSONIG00000040460 UniProt:  I3JEV9 LinkDB All DBs Position LG1:9634298..9640088 Genome browser AA seq 571 aa AA seqDB search MACCESNKGSLEEDSYDGAVGGVLSGCALAMLEKEQESILSPSENPSAFMSSSSLQAAPL QGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQRCPVDNEMLS EDQLFPDNFAKREILSLTVRCPNSGCAEKMELRHLEDHLVHCEFATVPCPQCQQSVKKSH LEEHITVQCQKRPMSCPDCVACFLYEERELHQQQCPFASVKCQYCELELVRDQMESHCDT DCPKAPIACNFSIFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTPKPLRTL GPSLSSEDQGAAASVPACSGSRGAAALSCNSSCAPGPSSEEMQQRLREMDGRLVKQDHQL RELIILKDTQAGQLAELRRRVSMLEDTVKELEAQHCNGIFIWRLKGFSVHLRNQEAGQPV VEHSPGFYTGRPGYKLCLRLHLQTPSAPRCSSYISLFVHTMQGAFDGQLTWPFQGTIRLA ILDQGPEGQHHMEAMETKPDLQAFQKPTIQRNPKGFGYVTFMHLSQLSQRAYVKDDTLLI RCEVTPRFDNILHREGPAVQPRGPEAFASRD NT seq 1716 nt NT seq  +upstreamnt  +downstreamnt atggcctgctgtgaaagcaataaggggagtttggaggaggacagctatgatggagctgtc ggtggagtgctgtctggctgtgctctggcaatgctggaaaaagaacaggagtccattctt agcccgtcagagaaccctagtgccttcatgagcagcagcagccttcaggctgcccccctg cagggctacgatgtggagtttgatccaccgctggagagtaaatacgagtgccccatttgt ctcatggctttgaggaacgccattcaaacacgctgtggtcaccgcttctgcaagagctgc attgagaaatccatccgtgatacgggacagaggtgcccagtggacaacgaaatgttgtca gaagaccaactgttccctgataactttgccaaaagggagattctgtcgctaactgtgcgc tgtccaaactcgggctgtgccgagaagatggagctccggcatttggaggatcatttggtg cattgtgagtttgccaccgtgccttgtccacagtgccagcagtctgtgaaaaagagccac ctagaagagcacataactgttcagtgccaaaaaagacccatgtcatgtccagactgtgtg gcatgctttctttatgaagagagagagcttcatcagcaacagtgtccctttgccagtgtg aagtgtcagtactgtgagctggagctcgtcagagaccagatggagtctcactgtgacaca gattgcccaaaagcacctattgcctgtaactttagcatctttggatgtaaggaaaggatg cagcgccacaacctggctcagcacatgcaggagttcacacagatgcatatgcgctacatg gctgaatttctgcgtggccttagcctcaacggtaccacacccaaacccctgaggacttta ggaccttcactttcctctgaggatcaaggagctgcagcatcagtaccggcctgtagtggg tccagaggggctgcagctctgagctgcaatagcagttgtgctccaggtccgtctagtgaa gagatgcagcagaggctccgtgagatggatggacgattggtgaagcaggatcaccagctg cgtgaactcatcatcttaaaagacacacaagcaggccagctggcagagctcaggcgtaga gtgtccatgctggaggatacagtgaaagagctggaggcccaacattgcaatggtatcttc atctggcgcctcaaaggtttttcagtccacctgcggaaccaagaagcgggccagccagtg gttgagcacagccccggcttttacacaggccgcccaggctacaagctatgcctgcgctta cacctgcagacccccagtgcccctcgctgctccagctacatctccctatttgtgcacacc atgcaaggagcttttgatgggcagcttacctggccatttcaaggaaccatccggctcgcc atcctagaccagggccctgagggtcagcatcacatggaggcaatggagactaaaccagat ctacaggccttccagaagccgacaattcagcgcaatcccaaaggatttggctatgtcacc ttcatgcacctgtctcagctgagtcagagagcttatgttaaagatgacactctgctcatc cgctgcgaggtgacgccacgttttgacaatatccttcatcgtgagggaccagctgtacag ccaagaggacctgaggcatttgcttcaagagactaa

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