Oreochromis niloticus (Nile tilapia): 100704245
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Entry
100704245 CDS
T06104
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
onl04145
Phagosome
onl04210
Apoptosis
onl04510
Focal adhesion
onl04520
Adherens junction
onl04530
Tight junction
onl04810
Regulation of actin cytoskeleton
onl04814
Motor proteins
onl04820
Cytoskeleton in muscle cells
onl05100
Bacterial invasion of epithelial cells
onl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100704245
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100704245
09143 Cell growth and death
04210 Apoptosis
100704245
09144 Cellular community - eukaryotes
04510 Focal adhesion
100704245
04520 Adherens junction
100704245
04530 Tight junction
100704245
09142 Cell motility
04814 Motor proteins
100704245
04820 Cytoskeleton in muscle cells
100704245
04810 Regulation of actin cytoskeleton
100704245
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100704245
05100 Bacterial invasion of epithelial cells
100704245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100704245
03019 Messenger RNA biogenesis [BR:
onl03019
]
100704245
03036 Chromosome and associated proteins [BR:
onl03036
]
100704245
03029 Mitochondrial biogenesis [BR:
onl03029
]
100704245
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100704245
04147 Exosome [BR:
onl04147
]
100704245
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100704245
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100704245
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
100704245
NuA4 complex
100704245
Chromatin remodeling factors
BAF complex
100704245
PBAF complex
100704245
GBAF(ncBAF) complex
100704245
SWR1 complex
100704245
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
100704245
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
100704245
Exosome [BR:
onl04147
]
Exosomal proteins
Proteins found in most exosomes
100704245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
100704245
NCBI-ProteinID:
XP_003444532
Ensembl:
ENSONIG00000014259
LinkDB
All DBs
Position
LG12:complement(36282691..36286973)
Genome browser
AA seq
375 aa
AA seq
DB search
MEDDISALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacatctctgccctcgttgttgataatggctccggtatgtgcaaagcgggt
tttgccggagacgatgccccccgtgccgtctttccctccatcgtcggtcgccctaggcac
cagggtgtgatggtgggaatgggacagaaggacagctacgtgggagacgaggctcagagc
aagagaggcatcctgaccctgaagtaccccatcgagcacggcatcgtcacgaactgggac
gacatggagaagatctggcatcacaccttctacaatgagctgcgtgttgctcctgaggag
catccagtgctgctgaccgaggctcctctcaaccccaaagccaacagggagaagatgaca
cagattatgttcgagaccttcaacactcctgccatgtacgtggccatccaggccgtgctg
tcgctgtatgcttctggtcgtaccacaggtattgtgatggactcgggtgacggtgtcagc
cacactgtgcccatttacgagggctacgctctgcctcacgccatcctccgtctggatctg
gctggcagagatctgacagactacctgatgaagatcctgacagagcgaggctacagcttc
accaccactgctgagcgtgagatcgtgcgtgacatcaaggagaagctctgctacgtggct
ctggactttgagcaggagatgcagacagcagcttcctcttcctccctggaaaagagctat
gagcttcctgatggacaagtcatcaccatcggcaatgagcggttccgctgtcccgaggcg
ctcttccagccttcgttcattggtatggagtcagctggtatccatgagaccacctacaac
agcatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacactgtgctgtcc
ggtggcaccaccatgtaccccggcatcgccgaccgcatgcagaaagagatcactgccctg
gccccgcccaccatgaaaattaagattatcgctccccccgagaggaagtactccgtctgg
attggtggctccatcctggcctctctctcgactttccagcagatgtggatcagcaagcag
gagtacgatgagtccggccccgccattgttcaccgcaagtgcttctaa
DBGET
integrated database retrieval system