Oreochromis niloticus (Nile tilapia): 100704275
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Entry
100704275 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein
KO
K06838
slit 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100704275
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100704275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRR_1
hEGF
LRRNT
LRR_9
LRRCT
EGF_TEN
LRR_14
LRR_EndoS
EGF_Teneurin
EGF_DL_JAG
EGF_3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
100704275
NCBI-ProteinID:
XP_003452015
Ensembl:
ENSONIG00000018325
LinkDB
All DBs
Position
LG13:complement(18314941..18398350)
Genome browser
AA seq
1535 aa
AA seq
DB search
MAIRESWFEAGMGRLAGQPLWMWVAMLSALIVGNASGCPALCTCSGTTVDCHGLGLKTMP
RNIPRNTERLELNGNNLTRITKSDFAGLKYLRVLQLVENQITVIERGAFDDMKELERLRL
NRNQLQQLPELLFQKNPGLSRLDLSENYIQSIPRKAFRGATDIKNLQLDKNHISCIEDGA
FRALRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTI
GLFTQCTAPPELRGLNVAEVQKHEFSCSGHQESSSPQPCSTGGGSCPAMCTCSNNIVDCR
GKGLTAIPANLPESMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGL
RSLNSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNK
IQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRTNPIETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYVIPGTEDSHLNNACNSDPVCPPKCRCESNVVDCSNLKLTKIPE
HIPASTSELRLNNNEITTLEATGAFKNLSQLKKINLSNNKITEIEDGAFEGASSVNELHL
TANQMDSVRSGMFRGLEGLRMLMLRNNKISCIHNDSFTGLHNVRLLSLYDNQLTTITPGA
FDTLQTLSTLNLLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPD
FRCEEGQEETSCVPRPQCPSECTCLETVVRCSNKHLHTLPKGIPRNVTELYLDGNQFSVV
PKELSAFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNSLRCIPKMAFSGLHSLRL
LSLHGNEISELPDGIFNDVSSLSHLAIGANPLYCDCHLRWLSDWVKTGYKEPGIARCAGP
QGMEGKLLLTTPAKKFECSGDVDTAVLAKCNPCLSSPCHNQGICHSDLVEIYRCSCPPGF
KGKNCETVLNACVSSPCANGGTCRMDANQEGQYSCTCPLGFEGPTCETNIDDCDDNDCEN
GATCIDGVNNYTCFCPPYYTGEMCEEMEDVCAPGRSPCQHESTCLITSSGPKCVCSPGYV
GDDCSVDYNDCEEHRCQNGAQCVDELSGYSCICPEGYSGQLCEVPPSLLSLCERADCQNN
APCVERGGRALCQCPPEFGGPRCEKLVSVNFIDRDSYLLLSDLKNWPQANITLQVSTAED
NGILLYNGDNDHMAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVN
LSIDGGLPTTMDSFGAXAALNGEAPLYVGGMPVDVHSGTFRLWQIQNSSSFHGCIQNLYI
NNELQDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGVQGPVCHCQPGWSGAHCDQPASN
PCQGSKCVHGKCIPLDSQSYRCECAEGYRGALCNQQGELFNPCRHLSCKHGRCQISDTGD
AYCHCESGYTGELCDAEIECRGEPVRDFYQVQRGYAICQTTRMVSWVECTGACDTGTCCA
SQRMKRRKYTFECSDGTTFSEEVEKTIKCGCVGCM
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggccattagagaaagctggtttgaggcaggcatgggtaggttggccgggcagccactc
tggatgtgggtggcgatgctctctgccctgatagtgggcaatgccagtggctgcccagcc
ctgtgtacctgcagcggaaccacagtagactgccatggactgggtctcaaaaccatgcca
aggaatatcccccgcaacactgaaagactggagctgaatgggaataacctcacacgaatc
actaagagtgacttcgctggactgaagtacctcagagttttgcagctggtggagaatcag
attactgtgattgagcgtggggcctttgatgacatgaaggagctggaaagactgcggctg
aaccgtaatcaactgcagcagcttcctgagttgctgtttcagaagaaccctggcctgtct
cgactagatctgagcgagaactacatccagtccattcccagaaaagctttcaggggagct
acagacatcaaaaacctccagctggataaaaaccacatcagctgcatagaggacggagcc
ttcagagctctgagaggcttggaagtgctaacactgaacaacaacaacatcagcagcatc
cccgtctctagcttcaaccacatgcccaaactacggactttccgtctccactcgaacaat
ctgaactgtgactgtcacctggcgtggttggcccagtggctcaggcagaggcctacaatt
ggcttattcacacaatgcactgcccctcctgagctcagaggacttaatgtggcagaagta
cagaagcatgaattcagctgctcaggacaccaggagtcttcaagcccgcagccttgcagc
actggtggaggctcttgtcctgccatgtgtacctgcagtaacaacatcgtggactgtaga
ggaaaaggtctgactgccatcccagcaaacctgcccgagagcatggctgaaatacgtctg
gagcagaatgggattaagtctgttccacccggagccttctctccctacaagaaactgcgt
aggatagatctgagcaacaaccagatctcagagatagctcctgatgccttccagggcctg
cggtccctcaactccttagtgctgtatggaaataagatcaccgatctgcctaagggggtg
tttgacggcctctacgcattacaacttctgttgctgaatgccaataagattcactgcgtt
cgtgccaacgccttccaggacctgcagaatctctcgctgctatcgctctatgacaacaag
atccaaaccctcgccaagggcaccttcacttcactacgagcaatacagacccttcacctg
gcccagaacccatttatttgcgactgtaatctgaagtggctggccgactacctgcgcacc
aacccgatcgagacgagcggcgcccgctgcgccagcccacggcggctcgcaaacaaacgc
atcgggcaaataaagagcaagaagttccgctgctctgccaaagagcagtacgtcatccca
ggcacagaggacagccatctgaacaatgcatgtaacagtgatccagtctgtcctcccaag
tgccgctgtgagtcgaatgtagtggactgctccaaccttaagctcaccaaaatccccgag
cacatacccgcatccaccagcgaactccgccttaacaacaatgagattacaactctggaa
gcaactggagcttttaagaacctttcccagctgaagaaaattaacctcagcaacaacaag
atcacagagattgaggatggggcatttgaaggcgcgtcctctgtcaatgagcttcacctc
acagccaatcagatggactcggttcgaagtgggatgttccgtggccttgagggactgcga
atgttgatgctgaggaacaacaagatcagctgtatccacaatgacagcttcacagggctt
cacaacgtccgtctgttgtctctgtacgacaaccagctgaccacaatcacacccggagcc
ttcgacaccctccagactctgtccactcttaacttattggccaactccttcaactgtgac
tgtcggctggcctggctaggtgattggctgaggagcaggaagattgtaacaggtaaccct
cgctgccagcgtcctgccttcctgaaggagatcccgctccaggatgtagctctgcctgac
ttccgctgtgaggaaggccaagaggagacgagctgtgtgcctcggccccagtgtcccagt
gaatgtacatgcttggagactgtggtgcgctgcagtaacaagcaccttcacacactgccc
aaaggcatccccaggaatgtgactgaactgtatctagatggaaaccagttcagtgttgtt
ccaaaagagctgtctgccttcaaatacctacagctggtagacctgagcaacaacaagata
aactctctgaccaactcatccttcgctaacatgagtcagcttaccactctaattctgagc
tataactcgctgcgctgtatccccaaaatggctttcagcggactgcactcacttcgactg
ctgtctcttcatggcaatgaaatctcagagcttcccgatggcatctttaatgacgtgtcc
tcactttcccatttggcaatcggtgccaaccccctgtactgtgactgtcacctgcgttgg
ctgtcggactgggtcaagactggatacaaagagcccggcatcgcccgctgtgctggtcct
cagggcatggagggcaaacttctgctgactacacctgcaaagaaatttgaatgttcaggt
gatgtggacacagcagtgttggccaagtgtaacccttgtctgtcgagtccgtgccacaac
caaggcatctgtcacagcgaccttgtggagatctacaggtgcagctgtcctccgggattc
aagggaaagaactgcgagacggttctgaacgcctgtgtgagcagcccatgtgccaatgga
ggaacctgccgaatggatgcaaatcaagagggacagtacagttgtacatgtccactgggc
ttcgagggcccgacttgcgaaaccaatattgatgactgcgatgacaatgactgcgagaac
ggcgctacctgcattgacggtgtcaacaactacacctgtttttgtcccccctattacaca
ggtgaaatgtgtgaagaaatggaagatgtgtgtgcccccggtcggagcccctgccaacac
gagtctacctgcctcatcacatcctccggacccaagtgtgtgtgttctcctggttatgtt
ggtgatgactgcagtgtagactataatgactgcgaggagcatcgctgtcagaatggagct
cagtgtgtggacgagctaagtggatattcgtgcatctgtcctgaaggatatagcggtcag
ttatgtgaggttcccccatctctactgtcactgtgcgaacgggccgactgccagaacaac
gccccatgtgtggagcgaggtgggcgtgccctctgccagtgtcctcctgagttcggaggg
ccacgctgtgagaagctggtcagcgtcaacttcatcgacagagactcctacctcttgctc
tctgaccttaagaactggcctcaagctaacatcacactacaggtatcaacagctgaggac
aatggtatcctgctgtacaatggagacaatgatcatatggcggtggagctctatcaaggt
catgtcaaggttagctatgaccccggcagtcagccaggacatgccatatacagtactgag
actatcaacgatggtcagttccacacagtggaactggtgacctttgaccagatggtgaac
ctgtccattgacgggggtctccctaccacaatggacagctttggggcgngtgcggccctc
aacggggaggctccactatacgtggggggcatgccggtagacgtgcactcgggcactttc
cgtctctggcagatccagaatagctccagtttccatggctgtatccagaacctgtacata
aacaacgagcttcaggacttcaccaagacccagatgaagcccggcgtggtaccgggctgc
gagccctgcaagaagatctactgcgtacatggcatctgccaacctgatggggtccaagga
cctgtttgccactgccagccaggctggagcggggcgcactgtgaccagcctgctagcaac
ccctgccagggcagcaagtgtgtccatggaaaatgcatccctctggattctcagtcatac
cgctgtgagtgtgcggagggttaccgcggagccctgtgtaaccagcaaggggagctgttt
aacccctgccgtcacctgtcctgcaaacatggtcgctgccagatctcagacacaggagat
gcatactgtcactgtgaaagtggctataccggagaactttgtgatgcagaaattgagtgc
agaggggaacctgtgcgagacttctaccaggtccagcggggatacgctatctgccagacg
acacgcatggtctcttgggtggagtgcactggagcctgcgacacagggacctgctgcgcc
agccagaggatgaaacgtcggaaatacaccttcgaatgcagcgatgggaccaccttcagc
gaggaggtggaaaagaccatcaagtgcggctgcgtgggctgcatgtag
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integrated database retrieval system
