Oreochromis niloticus (Nile tilapia): 100704567
Help
Entry
100704567 CDS
T06104
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100704567 (rnf123)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100704567 (rnf123)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100704567 (rnf123)
Multi subunit type E3
KPC complex
100704567 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100704567
NCBI-ProteinID:
XP_005462631
Ensembl:
ENSONIG00000000304
LinkDB
All DBs
Position
LG5:1457073..1573914
Genome browser
AA seq
1325 aa
AA seq
DB search
MSSKGGGTALTRRNYRLASDMDKPRSTGIVNEKLLSDYLHHVFPSTKQGPTLASLRKPLG
FQDLPAHLEKLLSEDTPTEDGQAVDGRLGPQPVVLDHTSGFEGLLFVDDDLLGVIGHSNF
SSIRATTCVYKGKWAYEVLISSQGLMQIGWCTLSCRFNQEEGVGDTPDSYAYDGNRVRKW
NVTTTNYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGTAFTNIKMGPGIAYFPAISLSF
KESVAFNFGSRPLRYPVDGYLPLQNPPAADLMKAHKLLGYIKNVLSTAIDTQEEGLVEKD
CAVWRLHGEPTVLVTLAHIFNHFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPLIQQL
LDLFWLLMEDHEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSRKYL
LSNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTHFDKEGKDELEPKDESADERL
RRRAYERGCQRLKKRIEVVEELQVQILRLLLNNKDKSTGEASRYIFLNKFRKFLQENASN
RGHPTALCPPEYMVCFLHRLITAVRGCWDEGHRKSLSSVSSDGAYVPPQLFYNGKVDYFD
LQRLGGLLSHLKKTLKDDLASKANIIIDPAEIQATSMDDLDEDDESGAAQRLPGAVAMGG
ALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLSQPEKVKVRTLAVEQRTEEDIEGSYG
NDGLLLGRPLEEPDQPNADKSLLEIVDGIVMMYNLSVHQQLGKMVVVSDDVHEYAVALKD
TEEKIARCPARRADILEELQKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDIYWLLCVC
IRTIEHADNTGSLFAFTPEFYLNVAMNAYSALKNYFSPANGMDELPGYEETLTQLAAILA
KHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQRVAMMKNLLAPYEQRPWAQ
TNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLLLQRHMAELLSMDKDM
AASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLRVL
EMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAEKNLFDRVVNLRLPGLESVDH
YPILVAVTGILVRILVDGDRQGVSRAASVLLSDPCFQLHSIQHLLGEGGESSSSAAVASS
VRPAVGSLGSSVAAPLPSATGSSERKHFSLHAYTDYISEEEKHRVELMLAFLTEESKQAA
ASTAPTSEEDLCPICYAHPISAIFKPCSHKSCKACINQHLMNNKDCFFCKATITGVEDYS
KPASS
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaagggaggcggcaccgctctgacccgccgtaactacaggctggcgtcagac
atggacaagccgagatccacaggtatcgtgaatgagaagctgctgagtgactacctacac
catgtgtttccttccactaaacagggacccacgctggcctcgctcaggaagcctctgggt
ttccaggatcttcctgctcacttggagaagctgctgtctgaggacacacctaccgaggac
ggtcaggctgtggacggtcgtctgggtcctcagcccgttgtcctcgatcacaccagcggc
tttgaaggactcctgtttgtggacgacgacctgctgggggtcatcggccacagcaacttc
agctccatccgagcgaccacctgtgtttataaagggaagtgggcctacgaggtgctgatc
tcctctcagggtctgatgcagataggctggtgtaccctcagctgtcgctttaatcaggag
gagggtgtaggtgacacgccagactcgtacgcttacgacggaaacagagtgagaaagtgg
aacgtgacgacgacaaactacggaaagtcgtgggcagcaggagacatcgtgagctgtctg
atagacctggatgaaggaaccatcacgttctgcctgaacggccagtctttggggacggcc
ttcaccaacattaagatgggtcctggcatcgcttactttcccgccatcagcctctccttt
aaagagtcagtggctttcaacttcggcagcaggcctctcaggtaccccgtggacggctac
ctgcccctccagaaccctccagctgcagacctgatgaaggcccacaaactactgggctac
atcaagaacgtcctgtccaccgccatcgacactcaggaggaggggctggtggagaaggac
tgcgccgtgtggaggcttcacggagaaccgaccgtcctcgtcactctggctcacatcttt
aaccacttcgctccactcatgtgtaaggtgtatctggtggaggacgtgctgatgaacttc
ctgctggggattctggagggaggaggttcggtggacgaacacccgctcatccagcagctg
ctcgacctcttctggctgctgatggaggaccacgaggtgaacgagtgtctgaagcaactc
atgatgtccttactcagggcctaccgcttctcccccatcatcccagacctgggcttccag
atacactacctgcggctgaccacggccatcctgcgccacgagaagtccaggaagtacctg
ctcagcaacgtcttattcgacgttctgcgctcggtcgtgttcttttacatcaagactcct
ctgagggtgaaggaggcggggctagaggagctcatcccaaccacctggtggcccacacac
ttcgacaaggagggtaaagacgagctcgagcccaaagacgagagcgctgacgagcgtctg
aggcgccgagcctacgaaagaggctgccagaggctgaagaagaggatcgaagtggtggag
gagttgcaggttcagatcctgaggctgctgctcaataacaaggacaagagcacgggagaa
gcctcgcgctacattttcctcaacaagttcaggaagttcctccaggaaaacgccagcaac
agagggcaccccacggctctgtgtccgcccgagtacatggtgtgtttcctgcaccgcctc
atcacggcggtcagaggctgctgggacgaaggacaccgcaagagtctgagcagcgtgagc
agcgacggggcctacgtccctcctcagctcttctataacgggaaggtggactacttcgat
ctgcagaggctgggcgggctgctgtcccacctgaagaaaaccctgaaagacgatttggcg
agtaaagccaacatcatcatcgaccccgcggagatccaggccacgtccatggacgacctg
gacgaggacgacgagagcggagctgctcagaggctgcctggggctgtggcgatgggcgga
gctctggcgaggcccagctggttgagttctcccactttgggtcgggccaaccgcttcctg
agcacggccgccgtcagcctgatgacccccaggcgacccctgagtcagccggagaaggtg
aaggtccgaacgctcgccgtggagcagcgcactgaagaggacatcgagggaagttatggc
aacgacggcctgttgctggggcgaccgctcgaggagcccgatcaaccaaatgcagacaag
tcgctgctggagatcgtggacgggatcgtgatgatgtacaacctgagtgtccatcagcag
ctggggaagatggtggtggtgtcagacgatgtccacgagtacgccgtggcgctgaaggac
acggaggagaagatcgcccgctgccccgccagaagggccgacatcctggaggagctccag
aagagccagaaggtttttgcggagaagctgaaccacctgagcaggaggctggcctggatc
aacgccaccatctactccaaggagaagatgctggacatctactggctgttgtgtgtctgc
atccgcaccatcgaacacgccgacaacaccggctctctcttcgccttcacaccagagttc
tacctcaacgtcgccatgaacgcgtacagcgccctgaagaactacttcagcccggctaac
ggcatggacgagctgcccggctacgaggaaactctgactcagctcgccgccatcctcgcc
aagcactttgcagatccacgcatcgtcgggacagatatcaaagactctctgatgcaggcg
ctggccagctacgtctgttacccacaatccctcagggccgtggagaggatcccggaggag
caacgagtggcaatgatgaagaacctgctggctccgtacgagcagagaccatgggcccag
accaactggatcctggtcagactgtggaggggttgtggttttggctacagatacactcgc
ctccctcatctcctgaaaaccaaacccgaggatgccaacctgcccagtctgcagaagccg
tgcccgtcgttgctgctgcagagacacatggcggagctgctcagcatggacaaagacatg
gccgcctctttcctcaacagcgtcctgaaccagctcaactgggccttctctgagttcatc
ggcatgatccaggagatccagcaggctgcggagcgtccagagaggaacttcgtggacact
cgtcagctgaaggtgtgtgcgacctgcttcgacctgtccgtcagcctgctgcgggtgctc
gagatgaccgtcactctggtgcctgagatcttcctggactggtcccgcccctccgcggag
ctgctgctcagacggctcgctcagctgctgaaccaggtgctgaaccgagtgacagcagag
aagaacctgtttgaccgagtcgtcaacctcagactgccagggctggagagcgtggaccac
taccccatcctggtggctgttaccggcatcctggttcggatcctggtggacggagaccgg
cagggggtatcccgagccgcctctgtcctgctctccgacccctgcttccagctccactcc
atccagcacctcctgggagaaggaggcgagtccagctcctcggcagccgtggcctccagc
gtgcgtcctgcggtgggctctctggggtcgtccgtggccgccccgctcccgtcggccact
ggaagctcagagcgcaaacacttctccctgcacgcatacaccgactacatcagtgaggag
gagaagcacagggtggagctgatgttggcctttctcaccgaggagtccaagcaggctgca
gccagcacagctcccaccagcgaggaagacctctgtcccatctgctacgctcaccccatc
tctgccatcttcaagccctgctcacacaagtcctgcaaagcctgcatcaaccagcacctg
atgaacaacaaggactgcttcttctgcaaggccaccatcaccggagtcgaagactacagc
aagccggcctcctcctaa
DBGET
integrated database retrieval system
