Oreochromis niloticus (Nile tilapia): 100707123
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Entry
100707123 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
100707123
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100707123
Protein phosphatases and associated proteins [BR:
onl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100707123
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100707123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YxzE
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
100707123
NCBI-ProteinID:
XP_003455059
Ensembl:
ENSONIG00000006300
LinkDB
All DBs
Position
LG3:complement(37697306..37891529)
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AA seq
1091 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HKRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSFWYLLMWLHNKLCRTGQPPGEEPHKCENLREFTERHADSLRQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRNYSSS
SETTKDDGAMASEDDSESGEGTGGGLGVQRSKSVTFMTPAEDDTKPTPTLGVSALVRSIS
GMTQIERGVGGEELEEGIEWGTEEEEEEGKPKSNGLKTTVISPSSTSVVPSSSSSFSSAF
SSSLARTRSRLQRLSGPSAKTDSFKRLSYLFSRSKRKAPPMPVPVQSPVSYTISDGLLRP
LGSHSHSDFGLSNVTRSETHLNEMGRSVDISNPSFSPRRTNGRDSLLTLPLPPPAPASLH
CASNMSESSSRLLDSSEDVFQSGGMGGSGDGSVDGGGGGGGVMMMGGWVGPCDDVIEDSC
EVIEDSVTTQL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctatgacgcagttgtactacaagaaggcgacatattcgccgtaccgcgaccgc
atcccacttcagattgtccgtgctgaggtggagctgtctgctgaggagcgggcctacctc
acagctgtagagaaaggcgactatgcgggagtgaaacatgcccttcgcgaagcagaggtg
tactacaacatggatgtgaactgtctggacccgctgggccgcagcgctctcctcatcgcc
atcgagaacgagaacctggagatcatggagctcctgctcgaccatggcatccacacgggc
gacgccctgctgtacgccatcaggaaggaggtggtgggtgccgtggaactgctgctgtca
cacaaaaggcccagcggagagaaacaggttccttctctgatgatggacagccagttttca
gagttcaccccagatataactcccatcatgcttgctgctcacacaaacaactacgagatt
atcaagctgcttgtccagcggaaggtcaccatacccagaccacatcagatacgatgcgac
tgtgttgagtgtgtatccagctcagaggtggacagccttcgacattcacggtctcgactc
aacatctacaaggctttggcctcgccatctctcattgcgttgtccagtgaagatcccatc
ctcactgccttcagactgggctgggaactcaaagaactcagcaaggtggagaatgagttt
cgtcaggagtatgaggaactgtctcagcagtgcaagcgtttcgccaaggaccttctggat
caggccaggagttctagagaacttgagaccatcctgaaccacagagacaatgaccagagt
gaggaactagaccctagacagtgccatgatctggccaagctcaaactcgccatcaagtac
caccaaaaagagtttgtggcacagccaaactgccagcagctgctggccacactgtggtat
gatggcttcccgggttggaggagacgacactgggtggttaaactggtcacctgcttcatc
atcggactcttgttcccggtcttctcattgatctacctgttggctccaaagagcgctctg
ggacgtttcattaagaagcccttcatcaagttcatctgtcacacggcgtcctacctgacc
tttctcttcctactgctgctggcctcgcagcacatcgcccgtaccaacctgcacatgcag
ggacccccacccaccatcgtggagtggatgatcctgccgtgggtgctgggcttcatctgg
gcagagattaaggagatgtgggacgggggattcacagagtacatccatgactggtggaat
ctgatggacttcgccatgaactccctctatctggccaccatatctctgaagatagtggcc
tatgtgaagtataactcctctcggcctagggaggagtgggagatgtggcacccgacgctg
atagctgaggctctgtttgccattgccaacatcttcagctctctcagactcatctccctc
ttcaccgccaactcccacctcgggccactgcagatctccttaggaaggatgcttctggac
atcctcaagtttctcttcatttactgtctggtcctgttagcatttgctaatggtttgaac
cagctgtatttctactatgaaaccaaggcatcagaggaacccaacaactgcaagggcatc
cgctgtgagaggcagaacaacgccttctcaacgttatttgagactctccagtctctcttc
tggtccatatttgggctgttaaatctgtacgtcaccaacgtgaaggctcgccacgagttt
acggagtttgtcggggcgaccatgttcgggacgtacaacgttatctcactggtggttctg
ctcaacatgctgatcgccatgatgaacaactcctaccaactcattgctgaccatgctgac
attgagtggaagtttgcacgcaccaagctgtggatgagttactttgacgagggcggcacg
ctgccacctccgttcaacatcattccaagccccaagtccttctggtacctcctcatgtgg
ctccacaacaagctgtgcaggacagggcagccgcccggggaggagccgcacaaatgtgaa
aacctgcgggagttcacggagcgtcatgccgacagtctgaggcagaatcagcactaccag
gaagtgatccggaacctggtgaagaggtacgtggcagcaatgatacgcagtgccaagaca
gacgaggggctgacagaggaaaactttaaggagctgaagcaagacatctccagtttccgc
tacgaggtcctagatctccttgggaaccggcgtcctcctcggcgtaactactcctcctcc
agtgagacaacaaaagatgacggtgccatggcatctgaggacgacagcgagtcaggtgaa
ggcactggaggaggcctgggagtccagagatcaaagagcgtgaccttcatgaccccagca
gaggacgacacaaagccgacaccaacgctcggcgtgtctgcactggtgcgttctatttct
ggaatgacgcagatagaaagaggggtaggtggggaggagctggaggaaggtattgaatgg
gggacagaggaggaggaagaggagggaaaaccaaagagcaatgggctgaagacaactgtc
atctctccatcctccacctctgttgtcccatcgtcatcttcatcattctcttcagcgttc
tcatcatcacttgctcgtacaaggagccgtctgcagcgcctatcaggtccgagtgcaaag
acggactctttcaaacgcctctcctacctgttctcccgctccaaacgcaaagccccaccc
atgcctgtccctgttcagtccccagtctcctacaccatctctgacgggttgctccgcccc
ttggggagccacagccactccgacttcggactcagcaacgtgaccagaagcgagactcac
ctgaacgagatgggccgctctgttgacatcagtaacccgtcgttctctcctcggagaacg
aatgggcgagactcacttttgacactgcccctcccgccccctgcccctgcctccctgcac
tgtgcttccaacatgtccgagtccagctcgcgcctcctggactccagtgaggacgttttc
cagagtggaggcatgggaggatcgggtgatggcagcgtggatggaggagggggaggagga
ggggtgatgatgatgggtggttgggtgggaccttgcgatgatgtcatagaggacagctgc
gaggtcatagaggactccgtcactacacagctatag
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