Oreochromis niloticus (Nile tilapia): 100707792
Help
Entry
100707792 CDS
T06104
Symbol
mmp13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100707792 (mmp13)
Peptidases and inhibitors [BR:
onl01002
]
Metallo peptidases
Family M10
100707792 (mmp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
100707792
NCBI-ProteinID:
XP_013124754
Ensembl:
ENSONIG00000005247
LinkDB
All DBs
Position
LG14:16472171..16477610
Genome browser
AA seq
460 aa
AA seq
DB search
MIAVVLLLALAAQSSAKPLSSEDIDKQLLAEKYLRRFYGLPSGLQGSRTSSNFLQAKIKE
MQKFFKLEVTGNLDDNTLAVMKEPRCGVPDIGEYNHFPRHLKWENNNVTFRIVNYTPDLK
KADVDKAIRRALNVWADVTPLTFKKLYEGNADIMISFGSKEHGDYNPFDGPGGLLAHAYP
PGQGIGGDTHFDEDEQWTKDSSAYNLFIVAAHELGHALGMSHSTDPGALMYPIYTYTTGY
PLAEDDIEGIQALYGPNPNPKKVKPRPDAPKKCDPELTFDAVTELRGETIIFKDRYYWRI
HPQMVEPELTLIKSTWPSIPNKVDAAYENPEKDLVIIFSGIRMWALNGYNLVDGYPKYIH
KLGLPKSVRKIDAAVHIKDTGKTLLFTDEDYWSYDETTETMDSGYPRSIEDDFPGIEDEV
DAAAYHYGYLYFFHEHLQYEYSYNSKKVFRIQRANSILNC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgtggtgctgctgctggcgctggccgcccagtcctctgctaagcctctgtca
tctgaagacattgacaagcagcttttagctgagaaataccttcgtcgattctatggcctt
ccaagtggtctccaaggtagtcggacgtcgtcaaatttccttcaagccaagatcaaggaa
atgcagaaattcttcaaactggaggtcacagggaatctagatgacaatactttagcagtg
atgaaggagcccagatgtggcgttccggacattggggagtacaatcacttccctcgacac
ctcaaatgggaaaataacaacgtcacattcaggatagtgaattacacaccagatctgaag
aaagcagatgtagacaaagccatccgcagggctctcaacgtttgggctgacgttactcct
ctgacttttaagaagctttacgagggcaatgcagacattatgatcagctttggatcaaaa
gagcatggagattacaacccatttgatgggcctggtggactgctggctcatgcctaccct
cctggccaaggcattggaggagacactcactttgatgaggatgaacagtggaccaaagat
tcatcggcttacaacctgtttatagtggcagcccatgagttgggccacgccctaggaatg
tcccattccacagacccaggcgcactgatgtatcccatctacacctatactacaggctac
ccgctggctgaagatgacattgaaggaattcaagccctctatggtccaaacccaaatccg
aagaaagtgaaaccaaggcccgacgccccgaaaaagtgtgaccccgagctaacttttgat
gctgtcacagagctcagaggagaaaccatcatcttcaaagacagatactactggcgcata
catcctcagatggtggagcctgaattgactctgattaagtccacatggccatctattccc
aacaaagtagatgcagcttatgagaacccagagaaggatttggtcatcatatttagtggg
atccgaatgtgggctttgaatggatacaaccttgtggatggttacccaaaatacattcat
aaacttggtcttcccaagagtgtcaggaaaatagatgcagccgtgcacatcaaagacact
gggaaaactctgctgttcaccgatgaagactactggagctatgatgaaacaacagaaacc
atggacagtggctacccacgatccattgaggatgactttcctggaatagaggatgaggtc
gacgctgctgcttatcactatggatacttgtatttcttccatgaacacctgcagtatgag
tacagttacaactcaaagaaggtttttcgcatccaaagagccaactccattctcaactgc
tga
DBGET
integrated database retrieval system
