Oreochromis niloticus (Nile tilapia): 100708205
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Entry
100708205 CDS
T06104
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain
KO
K06752
MHC class II antigen
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04145
Phagosome
onl04514
Cell adhesion molecules
onl04672
Intestinal immune network for IgA production
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100708205
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100708205
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100708205
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100708205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
100708205
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100708205
Exosomal proteins of epithelial cells
100708205
Exosomal proteins of breast milk
100708205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Psg1
Ig_3
C2-set_3
DUF2627
Motif
Other DBs
NCBI-GeneID:
100708205
NCBI-ProteinID:
XP_005459602
Ensembl:
ENSONIG00000041925
UniProt:
A0A669BMQ2
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Position
LG3:35261253..35264887
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AA seq
252 aa
AA seq
DB search
MASSFLCFTLLFISIHNADGFLEYIVDRCDFNSTELENMEYIYSHYYNKMEYIRFSSNVG
QYVGFTDFGVRLAEVWNNDTADLNLMRLKIATYCHHNIDINDRAILTKSVQPSVRIKSMT
PPSGQHPAMLVCSVYDFFPSKIKVSWLRDGQAVSSDITSTEEMPNGDWYYQTHSQLEYTP
RSGEKISCVVEHASLKEPLITDWDPSSDKSTSESTTLIAIGASILTLGLILLLAGFIFYR
WRARDPTLFSNE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttttctctgcttcaccctcctcttcatcagcatccacaatgcagatgga
tttttagagtatatagtggatcgctgtgactttaactccactgagcttgagaacatggag
tacatctactctcactattacaacaagatggagtacatcaggttcagcagcaatgtgggg
cagtatgttggattcactgactttggagtaaggctggcggaggtctggaacaatgatact
gcagacctgaatttaatgagacttaagatagcaacatactgccatcacaacattgatatt
aatgatcgggctattctgactaaatcagtccagcccagtgtcagaattaagtccatgacc
ccgccttctggtcagcatcctgccatgttggtctgcagcgtctacgacttctttcccagt
aagatcaaagtgagctggctcagagatggacaggccgtgtcctctgatatcacttccact
gaagagatgccaaatggtgattggtactaccagacccactcccaactggagtacacaccc
aggtctggagagaagatctcctgtgtggtggagcacgccagcctgaaggaacctctgatc
actgactgggatccgtcctcggacaaatcaacatctgaatcaactacgctgatcgccatc
ggagcctctatactgaccctgggtctgattttacttctggctggatttattttctacagg
tggagggcccgagatcctacactgttttccaatgaatga
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